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The map label for this gene is ydjX [C]

Identifier: 78780159

GI number: 78780159

Start: 1664807

End: 1665403

Strand: Reverse

Name: ydjX [C]

Synonym: PMT9312_1774

Alternate gene names: 78780159

Gene position: 1665403-1664807 (Counterclockwise)

Preceding gene: 78780160

Following gene: 78780155

Centisome position: 97.44

GC content: 26.97

Gene sequence:

>597_bases
ATGAATATCTTCCTAGAAAATATTTACAACTTGTCTTATTTTTTTAATACTGGAATTGGCGTCTTTTCATTTGTTTGCAT
TTATATTTTAATTGTTTTATTAATACTTCCAGCTTCTTGGTTATCTTTATTATCCGGTTTTTTATATGGCTCATATTTAG
GATCACTTATCGTTTTCATTTCCGCTTCTATAGGAGCATCAGTTTCATTTTTTGTATCAAAAAGTTTTTTTGCCAAAAAG
CTAAAAAACCTTTTTAGCCGTTATCCAAAATTAAGTATTATTGAAAAACTAGTAGAAAAAGGTGGACTTAAATTAATTTT
TTTAGCGAGATTATCGCCAATATTTCCATTCAGTATTCTTAATTATTTTTATGGTTTGAATAATGTTAAATTTAGAGATT
TCGCTCTTGGTCTTCTTGGAATAATTCCAGGAACTTTTTTTTATTGCTCAATAGGTGGTTTGGCAAAAAGTCTCCAGGAT
TTAAAAAATGTGCAATCACCAAATAATTTATATATGACTATCATTGGAATTATTTCAACTTTTTTAGTTGTATATTTCTT
AGCTAAATACTCCAGAGAATATTTTGAAAACTCCTAA

Upstream 100 bases:

>100_bases
AGGCTCCAAAAGATATTGTTGATGAATGCAGATTTAAATTAAATGAGGGTTCGGTACAAATGGAGAGAATTACTAAAAAA
CTCGAACTTTTGAATTGAGA

Downstream 100 bases:

>100_bases
GAATTTAATCTTTAATATTCCAATCTCTAATAGATGCAATTAAGATAAACCATAAAAGTCTAAATTTACCTAGTAAAGTT
TTGTTGGCTTCTAATTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MNIFLENIYNLSYFFNTGIGVFSFVCIYILIVLLILPASWLSLLSGFLYGSYLGSLIVFISASIGASVSFFVSKSFFAKK
LKNLFSRYPKLSIIEKLVEKGGLKLIFLARLSPIFPFSILNYFYGLNNVKFRDFALGLLGIIPGTFFYCSIGGLAKSLQD
LKNVQSPNNLYMTIIGIISTFLVVYFLAKYSREYFENS

Sequences:

>Translated_198_residues
MNIFLENIYNLSYFFNTGIGVFSFVCIYILIVLLILPASWLSLLSGFLYGSYLGSLIVFISASIGASVSFFVSKSFFAKK
LKNLFSRYPKLSIIEKLVEKGGLKLIFLARLSPIFPFSILNYFYGLNNVKFRDFALGLLGIIPGTFFYCSIGGLAKSLQD
LKNVQSPNNLYMTIIGIISTFLVVYFLAKYSREYFENS
>Mature_198_residues
MNIFLENIYNLSYFFNTGIGVFSFVCIYILIVLLILPASWLSLLSGFLYGSYLGSLIVFISASIGASVSFFVSKSFFAKK
LKNLFSRYPKLSIIEKLVEKGGLKLIFLARLSPIFPFSILNYFYGLNNVKFRDFALGLLGIIPGTFFYCSIGGLAKSLQD
LKNVQSPNNLYMTIIGIISTFLVVYFLAKYSREYFENS

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=126, Percent_Identity=31.7460317460317, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22346; Mature: 22346

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFLENIYNLSYFFNTGIGVFSFVCIYILIVLLILPASWLSLLSGFLYGSYLGSLIVFI
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SASIGASVSFFVSKSFFAKKLKNLFSRYPKLSIIEKLVEKGGLKLIFLARLSPIFPFSIL
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHCCCCCHHHHH
NYFYGLNNVKFRDFALGLLGIIPGTFFYCSIGGLAKSLQDLKNVQSPNNLYMTIIGIIST
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FLVVYFLAKYSREYFENS
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIFLENIYNLSYFFNTGIGVFSFVCIYILIVLLILPASWLSLLSGFLYGSYLGSLIVFI
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SASIGASVSFFVSKSFFAKKLKNLFSRYPKLSIIEKLVEKGGLKLIFLARLSPIFPFSIL
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHCCCCCHHHHH
NYFYGLNNVKFRDFALGLLGIIPGTFFYCSIGGLAKSLQDLKNVQSPNNLYMTIIGIIST
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FLVVYFLAKYSREYFENS
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]