Click here to switch to the map view.

The map label for this gene is 78780149

Identifier: 78780149

GI number: 78780149

Start: 1656076

End: 1657014

Strand: Direct

Name: 78780149

Synonym: PMT9312_1764

Alternate gene names: NA

Gene position: 1656076-1657014 (Clockwise)

Preceding gene: 78780143

Following gene: 78780150

Centisome position: 96.89

GC content: 35.78

Gene sequence:

>939_bases
ATGAATTCAGTAATTTTCCAAGAAACAGCAAAATTAAAAAAACCTGTTCCAGCTGAAAAAGTTATAGAACTCTCAGAAAA
ATTAGTAGAACCTTCCCGCCATTCAAAAAAATATCCTCCAAGACTTCATAAAACTTGGGGAACAATAGTTTTCATGGTTG
CAATTCATATTCTTTCCCTTATAGCTTTACAACCAAAGTTTTGGAGTCTACCTGCAGTCACATCATTATTATTTTTTTAC
TGGGTAACTGCTTGTTTAGGAGTCACTCTTGGATATCACAGATTGTTATCACACAGATCGTTCATTGTTCCAAGATGGTT
AGAAAGATTTTTTGCTACCTGCGGAGCTATAAGTTGCCAGCATGGACCTATTGATTGGGTGGGTTTACATAGGCATCACC
ACTCCTTTTCAGATACAGAAGTAGATCATCACAATAGTAAAAAAGGTTTTTGGTGGAGTCATATGGGTTGGATGTTTAAA
GACGTTGAAGCACTGAAAGCTGTACCAAAACTAAGTGCAGATTTAATTAAAGATCCATACTATAGATTCCTAAATAAATA
TTTTTTATTTTTGCAAATTCCTATTGGACTTTCTTTGTTCGCAATAGGTCAAAAATTAGGAGTTGGTGGTTGGGCTTTGG
TGCTATGGGGAATTCCATTGAGACTTGTAGTCGTTTATCACATAACCTGGCTAGTAAATTCAGCCACTCATTGTTGGGGT
AAGGCACCATTTGAAAGTGGTGACTCATCCAAAAATAATGCGTGGGTTGCTGCATTAACATTTGGAGAAGGTTGGCATAA
TAATCATCATGCATTCCCCAATTCTGCAAAACAAGGATTATTTAGAGGTCAAATCGATATAACTTGGGAACATATTAAGA
TTCTTGCGAAATTTGGTCTTGCAAAAAAAGTAAAGTTACCCTCTAGGTCTTATTATTAA

Upstream 100 bases:

>100_bases
ATTTATCGCGATATCCGAGACTCACAGATAATTAAACTTATCAATAGTATAGTATGATAATATTACATATCGGTAATTTT
GAAAATAGTATTTCAATATC

Downstream 100 bases:

>100_bases
CTATATTGTTCAATATTTTCATGGCTAAAAGAGTAAAAGTCGCATTAACTGAATCAATCGCATCACTGGGTAAAGAAGGA
GATCTAGTTGAAGTAGCACC

Product: Fatty acid desaturase, type 1

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Fatty Acid Desaturase Subfamily; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Family Proteiin; Stearoyl-CoA Desaturase; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Fatty Acid Desaturase Protein; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNSVIFQETAKLKKPVPAEKVIELSEKLVEPSRHSKKYPPRLHKTWGTIVFMVAIHILSLIALQPKFWSLPAVTSLLFFY
WVTACLGVTLGYHRLLSHRSFIVPRWLERFFATCGAISCQHGPIDWVGLHRHHHSFSDTEVDHHNSKKGFWWSHMGWMFK
DVEALKAVPKLSADLIKDPYYRFLNKYFLFLQIPIGLSLFAIGQKLGVGGWALVLWGIPLRLVVVYHITWLVNSATHCWG
KAPFESGDSSKNNAWVAALTFGEGWHNNHHAFPNSAKQGLFRGQIDITWEHIKILAKFGLAKKVKLPSRSYY

Sequences:

>Translated_312_residues
MNSVIFQETAKLKKPVPAEKVIELSEKLVEPSRHSKKYPPRLHKTWGTIVFMVAIHILSLIALQPKFWSLPAVTSLLFFY
WVTACLGVTLGYHRLLSHRSFIVPRWLERFFATCGAISCQHGPIDWVGLHRHHHSFSDTEVDHHNSKKGFWWSHMGWMFK
DVEALKAVPKLSADLIKDPYYRFLNKYFLFLQIPIGLSLFAIGQKLGVGGWALVLWGIPLRLVVVYHITWLVNSATHCWG
KAPFESGDSSKNNAWVAALTFGEGWHNNHHAFPNSAKQGLFRGQIDITWEHIKILAKFGLAKKVKLPSRSYY
>Mature_312_residues
MNSVIFQETAKLKKPVPAEKVIELSEKLVEPSRHSKKYPPRLHKTWGTIVFMVAIHILSLIALQPKFWSLPAVTSLLFFY
WVTACLGVTLGYHRLLSHRSFIVPRWLERFFATCGAISCQHGPIDWVGLHRHHHSFSDTEVDHHNSKKGFWWSHMGWMFK
DVEALKAVPKLSADLIKDPYYRFLNKYFLFLQIPIGLSLFAIGQKLGVGGWALVLWGIPLRLVVVYHITWLVNSATHCWG
KAPFESGDSSKNNAWVAALTFGEGWHNNHHAFPNSAKQGLFRGQIDITWEHIKILAKFGLAKKVKLPSRSYY

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148596961, Length=277, Percent_Identity=32.4909747292419, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI53759151, Length=304, Percent_Identity=31.5789473684211, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI148596938, Length=146, Percent_Identity=34.2465753424658, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17561774, Length=266, Percent_Identity=31.9548872180451, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17561776, Length=295, Percent_Identity=28.4745762711864, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17540878, Length=289, Percent_Identity=29.0657439446367, Blast_Score=117, Evalue=6e-27,
Organism=Saccharomyces cerevisiae, GI6321383, Length=243, Percent_Identity=32.5102880658436, Blast_Score=119, Evalue=5e-28,
Organism=Drosophila melanogaster, GI24646500, Length=289, Percent_Identity=32.8719723183391, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI21358571, Length=280, Percent_Identity=32.8571428571429, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24646295, Length=312, Percent_Identity=31.4102564102564, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24646303, Length=280, Percent_Identity=33.2142857142857, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24646299, Length=280, Percent_Identity=33.2142857142857, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24646305, Length=280, Percent_Identity=33.2142857142857, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24646301, Length=280, Percent_Identity=33.2142857142857, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24646297, Length=280, Percent_Identity=33.2142857142857, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24662393, Length=291, Percent_Identity=30.9278350515464, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI21358573, Length=284, Percent_Identity=30.9859154929577, Blast_Score=115, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35777; Mature: 35777

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVIFQETAKLKKPVPAEKVIELSEKLVEPSRHSKKYPPRLHKTWGTIVFMVAIHILSL
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IALQPKFWSLPAVTSLLFFYWVTACLGVTLGYHRLLSHRSFIVPRWLERFFATCGAISCQ
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
HGPIDWVGLHRHHHSFSDTEVDHHNSKKGFWWSHMGWMFKDVEALKAVPKLSADLIKDPY
CCCCCEEEHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
YRFLNKYFLFLQIPIGLSLFAIGQKLGVGGWALVLWGIPLRLVVVYHITWLVNSATHCWG
HHHHHHHEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC
KAPFESGDSSKNNAWVAALTFGEGWHNNHHAFPNSAKQGLFRGQIDITWEHIKILAKFGL
CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHHHHHHHCC
AKKVKLPSRSYY
HHEECCCCCCCC
>Mature Secondary Structure
MNSVIFQETAKLKKPVPAEKVIELSEKLVEPSRHSKKYPPRLHKTWGTIVFMVAIHILSL
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IALQPKFWSLPAVTSLLFFYWVTACLGVTLGYHRLLSHRSFIVPRWLERFFATCGAISCQ
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
HGPIDWVGLHRHHHSFSDTEVDHHNSKKGFWWSHMGWMFKDVEALKAVPKLSADLIKDPY
CCCCCEEEHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
YRFLNKYFLFLQIPIGLSLFAIGQKLGVGGWALVLWGIPLRLVVVYHITWLVNSATHCWG
HHHHHHHEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC
KAPFESGDSSKNNAWVAALTFGEGWHNNHHAFPNSAKQGLFRGQIDITWEHIKILAKFGL
CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHHHHHHHCC
AKKVKLPSRSYY
HHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA