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The map label for this gene is 78780121

Identifier: 78780121

GI number: 78780121

Start: 1622720

End: 1622917

Strand: Reverse

Name: 78780121

Synonym: PMT9312_1736

Alternate gene names: NA

Gene position: 1622917-1622720 (Counterclockwise)

Preceding gene: 78780123

Following gene: 78780120

Centisome position: 94.95

GC content: 34.85

Gene sequence:

>198_bases
ATGCAGGCAGTAAACTTTTTCTTCATAAATGCTCTTTTATTTGCATCTTTAATAGCAGTAGTGGGAGTACCATATTTCTA
TATGACACAGTCTGATCCATCTGATAGACGTAATCCAGAGATCAAGAAAGTTGAAATAATTGGAGGAGTTTGGTTCCATT
TAGTATTGATTGAGGGTGTTATTGCTAACTTGGTTTGA

Upstream 100 bases:

>100_bases
TTGCATTTTAAAGTAGCTAAAAGTATGTAAATTTTCTCCAAAAAAAATCACTTTCATGAGATTATAGTATTTATAATTAT
TAAAAATTCAAGATTGAATC

Downstream 100 bases:

>100_bases
ACTAAATACCTTTTCGTGAGAGTCTATTAATATATCGAAGTAAAATTTAATGGCTATTTTTGAAGGGTCTTTTACTAGTG
CATCTACTTTAAAAGTAGGA

Product: putative photosystem II reaction center protein Z

Products: NA

Alternate protein names: Photosystem II Core Protein PsbZ

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MQAVNFFFINALLFASLIAVVGVPYFYMTQSDPSDRRNPEIKKVEIIGGVWFHLVLIEGVIANLV

Sequences:

>Translated_65_residues
MQAVNFFFINALLFASLIAVVGVPYFYMTQSDPSDRRNPEIKKVEIIGGVWFHLVLIEGVIANLV
>Mature_65_residues
MQAVNFFFINALLFASLIAVVGVPYFYMTQSDPSDRRNPEIKKVEIIGGVWFHLVLIEGVIANLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7313; Mature: 7313

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAVNFFFINALLFASLIAVVGVPYFYMTQSDPSDRRNPEIKKVEIIGGVWFHLVLIEGV
CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHH
IANLV
HHHCC
>Mature Secondary Structure
MQAVNFFFINALLFASLIAVVGVPYFYMTQSDPSDRRNPEIKKVEIIGGVWFHLVLIEGV
CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHH
IANLV
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA