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The map label for this gene is 78780072

Identifier: 78780072

GI number: 78780072

Start: 1575410

End: 1575841

Strand: Reverse

Name: 78780072

Synonym: PMT9312_1687

Alternate gene names: NA

Gene position: 1575841-1575410 (Counterclockwise)

Preceding gene: 78780074

Following gene: 78780071

Centisome position: 92.2

GC content: 34.95

Gene sequence:

>432_bases
ATGAATGCTAGTTCAAATGTAAGTAATGTTGAAATAGCTAATAAGATTGCTACCACTGCAGCTTTGTTTCGGAAATATTT
TCCAGATGCAAGTGTAAATTTTAGTCCCTGGGAGAATTCAAATAATGAATCTATGAAGGATACTATTGATTTTGCGTTTC
ATTTCCCAGGTTGGAGTCCTCTCATTGAATGTAGAGCAATACTCCTACAATTAAGAATTGAAGATGCAAATAATAATGGA
GTCCCAAAATTGTTAGGAATAATAATGCGAGGTATGATTGTTCCCTCCGAGAGATGGAGAGTGGCTACTATCGGAGAGTG
GGAAATGACTGGTACTCATTTACCTCAAAAGGAGCAGAAAGATAATCTTTTTTTGGTTTGTAAAGAACTTTATAAGTTAT
TCTCTACAACATCCGCTAGTAACAAAAATTAG

Upstream 100 bases:

>100_bases
CTTTGTTGATCAGCATTTCAACATCTTTATTAAAAGAAAAAGTATTTAATAAGCAAGTTAAAGGAAATTATGTCATTTTC
AAAAAAACACTTAGCTATTT

Downstream 100 bases:

>100_bases
CTGTTTTATGTATTTTCCTTGTAGATTAAATACACATGTAAAATTAATTCAAAATAAATGGCAGTCGCTCTTGCAGGACA
ACTAAGAGAAGGGACAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNASSNVSNVEIANKIATTAALFRKYFPDASVNFSPWENSNNESMKDTIDFAFHFPGWSPLIECRAILLQLRIEDANNNG
VPKLLGIIMRGMIVPSERWRVATIGEWEMTGTHLPQKEQKDNLFLVCKELYKLFSTTSASNKN

Sequences:

>Translated_143_residues
MNASSNVSNVEIANKIATTAALFRKYFPDASVNFSPWENSNNESMKDTIDFAFHFPGWSPLIECRAILLQLRIEDANNNG
VPKLLGIIMRGMIVPSERWRVATIGEWEMTGTHLPQKEQKDNLFLVCKELYKLFSTTSASNKN
>Mature_143_residues
MNASSNVSNVEIANKIATTAALFRKYFPDASVNFSPWENSNNESMKDTIDFAFHFPGWSPLIECRAILLQLRIEDANNNG
VPKLLGIIMRGMIVPSERWRVATIGEWEMTGTHLPQKEQKDNLFLVCKELYKLFSTTSASNKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16184; Mature: 16184

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASSNVSNVEIANKIATTAALFRKYFPDASVNFSPWENSNNESMKDTIDFAFHFPGWSP
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCH
LIECRAILLQLRIEDANNNGVPKLLGIIMRGMIVPSERWRVATIGEWEMTGTHLPQKEQK
HHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCCCCCCCCC
DNLFLVCKELYKLFSTTSASNKN
CCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNASSNVSNVEIANKIATTAALFRKYFPDASVNFSPWENSNNESMKDTIDFAFHFPGWSP
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCH
LIECRAILLQLRIEDANNNGVPKLLGIIMRGMIVPSERWRVATIGEWEMTGTHLPQKEQK
HHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCCCCCCCCC
DNLFLVCKELYKLFSTTSASNKN
CCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA