| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78780063
Identifier: 78780063
GI number: 78780063
Start: 1566729
End: 1568141
Strand: Reverse
Name: 78780063
Synonym: PMT9312_1678
Alternate gene names: NA
Gene position: 1568141-1566729 (Counterclockwise)
Preceding gene: 78780064
Following gene: 78780062
Centisome position: 91.75
GC content: 30.71
Gene sequence:
>1413_bases ATGTATAACAAATATATAAAACTTAAGCTTTTAGAAGGGTTTATAGGTAATTTAGTATCAAAATTAAAGAAGGCGGCACC CAGATTCGAACTGGGGATAAAGGATTTGCAATCCTCTGCCTTACCACTTGGCCATGCCGCCGAAAAAGATTTAATGCAAT CTTTTTATGATCTTAACAGTAAGGTGACTCATTCTATATTATTTATATGCAATGGCCATGGAGAAGATGTAATCGCATCG GAAATAATAAAAAGATTATTAAAGAAAATAAAAAATAAAAATATCGAAGTCTTGCCTTTAGTAGGAAATGGAGATGTATT TAATTCCATAAAATCAAAGAATTTTTGTAAAATAGGCTATTTAAAAGAGCTACCTAGTGGAGGTTTTAGTAATCAAAGTC TGAAGGGATTTTTGCTTGATTTGTTTGCAGGATTTTTAATAGATAATTTAAGAAATTTTTTAATTGTAAAACAAAAGTCA AAACATAACTGCAAAATTATTGCAGTTGGAGATTTTCTACCATTACTTTATGCTTGGAGTTCAGAATGCGAATTCAGTTT TATTGGCACTCCCAAAAGTGACCATACTTGGAGTAGTGGACCAGGTTGGGCGTTAAGCGATTTTTATCATAAGTTGAAAG GTTCTGAATGGGACCCATGGGAAATGTTTTTAATGACATCTCCAAGATGTAAAAATTTAATTATGAGAGATCAAATAACA GCTAATAATTTGAATAGAAAAAATATTCATGCAACATATTTTGGCAATCCAATGATGGATTTTGTTAATTCAAAAAATGA AAAGATATCCAATATTATTGCTTTCAAAAGGATAATTTTATTAGTTGGAAGTAGATACCCAGAAGCATTTAAAAATCTTG ATAATTTTCTTGATTGTTTGCAAGATTTTGATTTATCTAAGAATTTGGTAATACTTTTGCCTTTGAGCATTAATGCGAAT GTGCTGCAAATTCAAAGTTATTTAAATAAATACGGTTTTAAAAAACAAAGTAAAACTAAATTTTTGATTGATCAAGATTC AGTATGGAAGAAGAAAGAAAAATATATATTGATTGGAAAAGGCAAATTCAATTTATGGGCCAATATGGCAGATATTGGCT TGTCTAATGCAGGAACTGCCACAGAGCAAATTGCTGGCTTAGGAATACCTTCTCTGTCACTTCCAGGATCTGGACCACAA TTCACAAAATCATTTGCAAAAAGGCAATCAAGATTATTAGGGGGAAGTGTTTTAGTTTGCAAGAATAAAGAAATTCTTTT AAAACGTTTAAGTTTACTGTTGAGAGAAAAAGTTGCTAGGTTAGAACAATCGAAAATTGGTAAAAAAAGAATGGGGAAAT CTGGCGCAAGTCAGAAAATTGTAGATTCTATAAACTCTCATTTGTTATCTTAG
Upstream 100 bases:
>100_bases CTCTGTAGTCAGCAAGTGAGATAATAAAATTATTACAAATATTTTGGAATCAAAATTTGGTCAACTTGCCGACCACTAAT TCGTCTAAATTCCACCAAAA
Downstream 100 bases:
>100_bases TAAATAACATTAGCGTTTTAATTTTTTTATGTATCCAATAAATGATCGGAAATATCTGAAAATTTGTGCAGAGATTGCAA AACTAATGAGTATAAGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MYNKYIKLKLLEGFIGNLVSKLKKAAPRFELGIKDLQSSALPLGHAAEKDLMQSFYDLNSKVTHSILFICNGHGEDVIAS EIIKRLLKKIKNKNIEVLPLVGNGDVFNSIKSKNFCKIGYLKELPSGGFSNQSLKGFLLDLFAGFLIDNLRNFLIVKQKS KHNCKIIAVGDFLPLLYAWSSECEFSFIGTPKSDHTWSSGPGWALSDFYHKLKGSEWDPWEMFLMTSPRCKNLIMRDQIT ANNLNRKNIHATYFGNPMMDFVNSKNEKISNIIAFKRIILLVGSRYPEAFKNLDNFLDCLQDFDLSKNLVILLPLSINAN VLQIQSYLNKYGFKKQSKTKFLIDQDSVWKKKEKYILIGKGKFNLWANMADIGLSNAGTATEQIAGLGIPSLSLPGSGPQ FTKSFAKRQSRLLGGSVLVCKNKEILLKRLSLLLREKVARLEQSKIGKKRMGKSGASQKIVDSINSHLLS
Sequences:
>Translated_470_residues MYNKYIKLKLLEGFIGNLVSKLKKAAPRFELGIKDLQSSALPLGHAAEKDLMQSFYDLNSKVTHSILFICNGHGEDVIAS EIIKRLLKKIKNKNIEVLPLVGNGDVFNSIKSKNFCKIGYLKELPSGGFSNQSLKGFLLDLFAGFLIDNLRNFLIVKQKS KHNCKIIAVGDFLPLLYAWSSECEFSFIGTPKSDHTWSSGPGWALSDFYHKLKGSEWDPWEMFLMTSPRCKNLIMRDQIT ANNLNRKNIHATYFGNPMMDFVNSKNEKISNIIAFKRIILLVGSRYPEAFKNLDNFLDCLQDFDLSKNLVILLPLSINAN VLQIQSYLNKYGFKKQSKTKFLIDQDSVWKKKEKYILIGKGKFNLWANMADIGLSNAGTATEQIAGLGIPSLSLPGSGPQ FTKSFAKRQSRLLGGSVLVCKNKEILLKRLSLLLREKVARLEQSKIGKKRMGKSGASQKIVDSINSHLLS >Mature_470_residues MYNKYIKLKLLEGFIGNLVSKLKKAAPRFELGIKDLQSSALPLGHAAEKDLMQSFYDLNSKVTHSILFICNGHGEDVIAS EIIKRLLKKIKNKNIEVLPLVGNGDVFNSIKSKNFCKIGYLKELPSGGFSNQSLKGFLLDLFAGFLIDNLRNFLIVKQKS KHNCKIIAVGDFLPLLYAWSSECEFSFIGTPKSDHTWSSGPGWALSDFYHKLKGSEWDPWEMFLMTSPRCKNLIMRDQIT ANNLNRKNIHATYFGNPMMDFVNSKNEKISNIIAFKRIILLVGSRYPEAFKNLDNFLDCLQDFDLSKNLVILLPLSINAN VLQIQSYLNKYGFKKQSKTKFLIDQDSVWKKKEKYILIGKGKFNLWANMADIGLSNAGTATEQIAGLGIPSLSLPGSGPQ FTKSFAKRQSRLLGGSVLVCKNKEILLKRLSLLLREKVARLEQSKIGKKRMGKSGASQKIVDSINSHLLS
Specific function: Unknown
COG id: COG4370
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52857; Mature: 52857
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNKYIKLKLLEGFIGNLVSKLKKAAPRFELGIKDLQSSALPLGHAAEKDLMQSFYDLNS CCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC KVTHSILFICNGHGEDVIASEIIKRLLKKIKNKNIEVLPLVGNGDVFNSIKSKNFCKIGY HHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCEEECC LKELPSGGFSNQSLKGFLLDLFAGFLIDNLRNFLIVKQKSKHNCKIIAVGDFLPLLYAWS HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEECCHHHHHHHCC SECEFSFIGTPKSDHTWSSGPGWALSDFYHKLKGSEWDPWEMFLMTSPRCKNLIMRDQIT CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCC ANNLNRKNIHATYFGNPMMDFVNSKNEKISNIIAFKRIILLVGSRYPEAFKNLDNFLDCL CCCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QDFDLSKNLVILLPLSINANVLQIQSYLNKYGFKKQSKTKFLIDQDSVWKKKEKYILIGK HHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHCCCCCEEEEEC GKFNLWANMADIGLSNAGTATEQIAGLGIPSLSLPGSGPQFTKSFAKRQSRLLGGSVLVC CCCCEEECHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE KNKEILLKRLSLLLREKVARLEQSKIGKKRMGKSGASQKIVDSINSHLLS CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MYNKYIKLKLLEGFIGNLVSKLKKAAPRFELGIKDLQSSALPLGHAAEKDLMQSFYDLNS CCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC KVTHSILFICNGHGEDVIASEIIKRLLKKIKNKNIEVLPLVGNGDVFNSIKSKNFCKIGY HHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCEEECC LKELPSGGFSNQSLKGFLLDLFAGFLIDNLRNFLIVKQKSKHNCKIIAVGDFLPLLYAWS HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEECCHHHHHHHCC SECEFSFIGTPKSDHTWSSGPGWALSDFYHKLKGSEWDPWEMFLMTSPRCKNLIMRDQIT CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCC ANNLNRKNIHATYFGNPMMDFVNSKNEKISNIIAFKRIILLVGSRYPEAFKNLDNFLDCL CCCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QDFDLSKNLVILLPLSINANVLQIQSYLNKYGFKKQSKTKFLIDQDSVWKKKEKYILIGK HHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHCCCCCEEEEEC GKFNLWANMADIGLSNAGTATEQIAGLGIPSLSLPGSGPQFTKSFAKRQSRLLGGSVLVC CCCCEEECHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE KNKEILLKRLSLLLREKVARLEQSKIGKKRMGKSGASQKIVDSINSHLLS CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA