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The map label for this gene is 78780056

Identifier: 78780056

GI number: 78780056

Start: 1560159

End: 1561523

Strand: Reverse

Name: 78780056

Synonym: PMT9312_1671

Alternate gene names: NA

Gene position: 1561523-1560159 (Counterclockwise)

Preceding gene: 78780057

Following gene: 78780055

Centisome position: 91.36

GC content: 29.52

Gene sequence:

>1365_bases
ATGAAATCACAAATAACTATAAAAAAAATTCAAGACCTTTTGATTAAAGGAGTTCAAACTATACATGTGGATGATGATTC
ATCCAGAAGAATGTGGTGGGCTTCTTTAGAAGTTATTCAGAAAGATTTCCTATCTCAAAATTATAAACAGGGGGGGATTT
GGGTTGCCTCACCTTTGCCTGCTTTTAATGATAAAAAATTTTTAAATCAATTTTATGGATGGCTTTGGTCTCCTGAGGGT
TTTCCATATTTTCAGAATAAGAATGCAGGTTTTTTACCAGTCAAAAATTTAGACAAGATAAAAAAAGATTTCGATTTAGT
TAGTAATTATAAAGTCTTAAATCTTAGTCAAGAAGATGGTTATGAACCTTTTTTAATGATAATCACCCCAAATTTTCAAT
GCATATTATCAATTGTAGGAGAAAAAGATAAGAAAATTTTATTAATGAAGTGTGATGAAGAAAGCCTTAAACTTTCAATT
GAATTAATGCATGCAAAATTAAACCAAGAAAATTATGAGGAAGGAGTAAAATTTCGTAATGCAATCAATAATTTAGGTAA
CCTTAATATTAATAATCAATTTGAAAAATTATTTTGGCCAACATTATCGGCAAAATTAGCAAATATTGCTCCAAATCATA
ATATACAGAATTCTGTAAAAAACGATGAAAAAAATGTGCAAATAACTGAAGCAAAATTGTTAAGTGCAATTTCTCATGAA
GTCAGAACTCCCTTAGCTACTATAAGAACCCTAATAAGTTCTACTTTAAAAAAATATAATATGGATGAATCAATGAGAAA
TCGTTTGATTCAAATAGATAATGAATGTAATGAACAAATTGATAGGTTCGGTTTAATTTTTAATGCTGCAGAATTAGTAA
GTAACGAAGTTACTTCATCAAATAATTTGGCAAAAATTAATTTAGCCGAAATTTTTAAAAAACTTTCTCCTGTATGGAAT
AAACAATTAAACCGACGTGGGATTTTTTTCAAGATAGACATCCCCAGTCAACTTCCGCAAATTTTGAGTGATTCTGAAAA
ACTAGAATTAATGTTAAGGGGATTAATTGATAAAAATACTAGAGGATTGAAAGAGGGCAGTACATTAGTTTTAGAATTAA
GACCAGCTGGCCAAAAACTAAAACTTCAACTAAAAGTACAAAAATCAGATTGTAATCGAAAAGAAATATTAAAAAAAGAA
AATGGTTCTGATATAGGTCCTGTTTTAAATTGGAACCCTCAAACGGGGAGTTTACAACTAAGTCAAAATGCCACTCAAAA
GTTGTTAGCAAGTTTAGGAGGGCATGTTACTCAAAGGCGTGATACAGGTTTGACAGTATTTTTCCCCATTTCAGATTCAA
AATGA

Upstream 100 bases:

>100_bases
TTCCTTTTATGAGCTATGGTCGAACGTCATTGGTGACTAATTTTATATCTATTGGATTTGTTTTATCTATATTGAAACGT
TCTAGATCACTAAGAAATTG

Downstream 100 bases:

>100_bases
AATGAGAAATAACTTTAATATTTATTAAATAATGTAGAAACTTTCTTGTAAATTTTGAATTTTGTAAAATATGAATGCTA
ATTTCTTAGTATAAATAACT

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: Two-Component Sensor Histidine Kinase; Sensor Histidine Kinase; Signal Transduction Histidine Kinase; Histidine Kinase A Domain Protein; Two Component System Sensor Histidine Kinase; Sensory Transduction Histidine Kinase

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MKSQITIKKIQDLLIKGVQTIHVDDDSSRRMWWASLEVIQKDFLSQNYKQGGIWVASPLPAFNDKKFLNQFYGWLWSPEG
FPYFQNKNAGFLPVKNLDKIKKDFDLVSNYKVLNLSQEDGYEPFLMIITPNFQCILSIVGEKDKKILLMKCDEESLKLSI
ELMHAKLNQENYEEGVKFRNAINNLGNLNINNQFEKLFWPTLSAKLANIAPNHNIQNSVKNDEKNVQITEAKLLSAISHE
VRTPLATIRTLISSTLKKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNEVTSSNNLAKINLAEIFKKLSPVWN
KQLNRRGIFFKIDIPSQLPQILSDSEKLELMLRGLIDKNTRGLKEGSTLVLELRPAGQKLKLQLKVQKSDCNRKEILKKE
NGSDIGPVLNWNPQTGSLQLSQNATQKLLASLGGHVTQRRDTGLTVFFPISDSK

Sequences:

>Translated_454_residues
MKSQITIKKIQDLLIKGVQTIHVDDDSSRRMWWASLEVIQKDFLSQNYKQGGIWVASPLPAFNDKKFLNQFYGWLWSPEG
FPYFQNKNAGFLPVKNLDKIKKDFDLVSNYKVLNLSQEDGYEPFLMIITPNFQCILSIVGEKDKKILLMKCDEESLKLSI
ELMHAKLNQENYEEGVKFRNAINNLGNLNINNQFEKLFWPTLSAKLANIAPNHNIQNSVKNDEKNVQITEAKLLSAISHE
VRTPLATIRTLISSTLKKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNEVTSSNNLAKINLAEIFKKLSPVWN
KQLNRRGIFFKIDIPSQLPQILSDSEKLELMLRGLIDKNTRGLKEGSTLVLELRPAGQKLKLQLKVQKSDCNRKEILKKE
NGSDIGPVLNWNPQTGSLQLSQNATQKLLASLGGHVTQRRDTGLTVFFPISDSK
>Mature_454_residues
MKSQITIKKIQDLLIKGVQTIHVDDDSSRRMWWASLEVIQKDFLSQNYKQGGIWVASPLPAFNDKKFLNQFYGWLWSPEG
FPYFQNKNAGFLPVKNLDKIKKDFDLVSNYKVLNLSQEDGYEPFLMIITPNFQCILSIVGEKDKKILLMKCDEESLKLSI
ELMHAKLNQENYEEGVKFRNAINNLGNLNINNQFEKLFWPTLSAKLANIAPNHNIQNSVKNDEKNVQITEAKLLSAISHE
VRTPLATIRTLISSTLKKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNEVTSSNNLAKINLAEIFKKLSPVWN
KQLNRRGIFFKIDIPSQLPQILSDSEKLELMLRGLIDKNTRGLKEGSTLVLELRPAGQKLKLQLKVQKSDCNRKEILKKE
NGSDIGPVLNWNPQTGSLQLSQNATQKLLASLGGHVTQRRDTGLTVFFPISDSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51835; Mature: 51835

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQITIKKIQDLLIKGVQTIHVDDDSSRRMWWASLEVIQKDFLSQNYKQGGIWVASPLP
CCCCCHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCC
AFNDKKFLNQFYGWLWSPEGFPYFQNKNAGFLPVKNLDKIKKDFDLVSNYKVLNLSQEDG
CCCCHHHHHHHHCCEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC
YEPFLMIITPNFQCILSIVGEKDKKILLMKCDEESLKLSIELMHAKLNQENYEEGVKFRN
CCCEEEEECCCHHHHHHHHCCCCCEEEEEECCCCHHEEEEEHHHHHHCHHHHHHHHHHHH
AINNLGNLNINNQFEKLFWPTLSAKLANIAPNHNIQNSVKNDEKNVQITEAKLLSAISHE
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEHHHHHHHHHHHH
VRTPLATIRTLISSTLKKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNEVTSS
HHCHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC
NNLAKINLAEIFKKLSPVWNKQLNRRGIFFKIDIPSQLPQILSDSEKLELMLRGLIDKNT
CCEEEEEHHHHHHHHCHHHHHHHCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHCCCC
RGLKEGSTLVLELRPAGQKLKLQLKVQKSDCNRKEILKKENGSDIGPVLNWNPQTGSLQL
CCCCCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHCCCCCCCCCEECCCCCCCEEE
SQNATQKLLASLGGHVTQRRDTGLTVFFPISDSK
CHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MKSQITIKKIQDLLIKGVQTIHVDDDSSRRMWWASLEVIQKDFLSQNYKQGGIWVASPLP
CCCCCHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCC
AFNDKKFLNQFYGWLWSPEGFPYFQNKNAGFLPVKNLDKIKKDFDLVSNYKVLNLSQEDG
CCCCHHHHHHHHCCEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC
YEPFLMIITPNFQCILSIVGEKDKKILLMKCDEESLKLSIELMHAKLNQENYEEGVKFRN
CCCEEEEECCCHHHHHHHHCCCCCEEEEEECCCCHHEEEEEHHHHHHCHHHHHHHHHHHH
AINNLGNLNINNQFEKLFWPTLSAKLANIAPNHNIQNSVKNDEKNVQITEAKLLSAISHE
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEHHHHHHHHHHHH
VRTPLATIRTLISSTLKKYNMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVSNEVTSS
HHCHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC
NNLAKINLAEIFKKLSPVWNKQLNRRGIFFKIDIPSQLPQILSDSEKLELMLRGLIDKNT
CCEEEEEHHHHHHHHCHHHHHHHCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHCCCC
RGLKEGSTLVLELRPAGQKLKLQLKVQKSDCNRKEILKKENGSDIGPVLNWNPQTGSLQL
CCCCCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHCCCCCCCCCEECCCCCCCEEE
SQNATQKLLASLGGHVTQRRDTGLTVFFPISDSK
CHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA