Click here to switch to the map view.

The map label for this gene is rpl36

Identifier: 78780015

GI number: 78780015

Start: 1528087

End: 1528203

Strand: Reverse

Name: rpl36

Synonym: PMT9312_1815

Alternate gene names: 78780015

Gene position: 1528203-1528087 (Counterclockwise)

Preceding gene: 78780016

Following gene: 78780014

Centisome position: 89.41

GC content: 37.61

Gene sequence:

>117_bases
ATGAAGGTCAGATCTTCAGTCAAAAAAATTAGCCCTGACGATCAGATCGTGAGGAGAAGAGGTAAAATCTATGTTATTAA
CAAGAAAAGACCTCGCAATAAACAACGTCAGGGTTAA

Upstream 100 bases:

>100_bases
TGCTGATAGAGATTTAAAAACCATTTCCTCTGATATCAAACAAAAAATGGCTTGATGATGATGTAGAATATAGAATTAAC
GTTTTATTTGTAAAACCCCT

Downstream 100 bases:

>100_bases
ATTTAAACCCTTTAATTAAAACTTTTACTTACTCAAAACACGTGGCCAGGATTGCAGGAATTGACATACCTCGCGAAAAG
CGAGTTGAAATTGCACTTAC

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 38

Protein sequence:

>38_residues
MKVRSSVKKISPDDQIVRRRGKIYVINKKRPRNKQRQG

Sequences:

>Translated_38_residues
MKVRSSVKKISPDDQIVRRRGKIYVINKKRPRNKQRQG
>Mature_38_residues
MKVRSSVKKISPDDQIVRRRGKIYVINKKRPRNKQRQG

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL36_PROM9 (Q318K4)

Other databases:

- EMBL:   CP000111
- RefSeq:   YP_398127.1
- ProteinModelPortal:   Q318K4
- SMR:   Q318K4
- STRING:   Q318K4
- GeneID:   3766450
- GenomeReviews:   CP000111_GR
- KEGG:   pmi:PMT9312_1631
- HOGENOM:   HBG734088
- ProtClustDB:   PRK00831
- BioCyc:   PMAR74546:PMT9312_1815-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- PANTHER:   PTHR18804
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 4565; Mature: 4565

Theoretical pI: Translated: 12.42; Mature: 12.42

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRSSVKKISPDDQIVRRRGKIYVINKKRPRNKQRQG
CCCCCCHHCCCCCHHHHHCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKVRSSVKKISPDDQIVRRRGKIYVINKKRPRNKQRQG
CCCCCCHHCCCCCHHHHHCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA