Click here to switch to the map view.

The map label for this gene is psaL [H]

Identifier: 78779995

GI number: 78779995

Start: 1510092

End: 1510682

Strand: Reverse

Name: psaL [H]

Synonym: PMT9312_1611

Alternate gene names: 78779995

Gene position: 1510682-1510092 (Counterclockwise)

Preceding gene: 161350029

Following gene: 78779993

Centisome position: 88.39

GC content: 38.92

Gene sequence:

>591_bases
ATGAGCGATTCACAAACACCATTAGGAGCCAATCCTAAATTTCCCGAAAAATATATAGATCAAAGTGTCCTGCCTACAGA
TATTGGTATCGCAGAACAATGGGCTGTTAAAACTGTTGCTGATCCGTTTGTTGGGAATTTGGCTACCCCAGTTAATAGTG
GTTATTTTACCAAAGTTTTTATAAATAATTTACCTTTTTATAGAGAAGGCATTTCTCCAAATTTTAGAGGTTTAGAAACT
GGAGCGGCTTTAGGTTATCTCTTATATGGTCCATTTACTATGACTGGTCCTTTAAGAAATTCTGATTTCGCATTAACCGC
AGGATTACTTGCTGCTATTGGCGCGGTTCATATTTTGACAGCACTTTTAGTTCTTTATAACGCCCCAGGTAAAGCACCTA
ATGTGCAACCTCCTGATGCTACTGTTAATAATCCTCCTGCAGATTTATTTACTAGAGCAGGGTGGGCTGACTTTACAAGT
GGATTTTGGCTAGGCGGTTGCGGTGGTGCAGTTTTTGCATGGCTTCTTGTTGGAACACTGCATTTGAACAACATAATGCA
ACTAATTCAGAATATTTGGACTACTGGTTAA

Upstream 100 bases:

>100_bases
CATGATTGGCTTGGTAGCACCTGCTGTTTTTATTGTTTTAATAGGCAGATTCATAACGGCTACTGAATAAAAATTAATTA
TCACATTATCCTTTTTTAAA

Downstream 100 bases:

>100_bases
TTTTAAAATTTAAAGAAGGTCTTATATTTTAATTTAATTAAAAGACTGCTATCTAATACTTCTATCCCACCTATAATTTC
TTACGACTCTTCCGGCTGAG

Product: photosystem I reaction center protein subunit XI

Products: NA

Alternate protein names: PSI subunit V; PSI-L [H]

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSDSQTPLGANPKFPEKYIDQSVLPTDIGIAEQWAVKTVADPFVGNLATPVNSGYFTKVFINNLPFYREGISPNFRGLET
GAALGYLLYGPFTMTGPLRNSDFALTAGLLAAIGAVHILTALLVLYNAPGKAPNVQPPDATVNNPPADLFTRAGWADFTS
GFWLGGCGGAVFAWLLVGTLHLNNIMQLIQNIWTTG

Sequences:

>Translated_196_residues
MSDSQTPLGANPKFPEKYIDQSVLPTDIGIAEQWAVKTVADPFVGNLATPVNSGYFTKVFINNLPFYREGISPNFRGLET
GAALGYLLYGPFTMTGPLRNSDFALTAGLLAAIGAVHILTALLVLYNAPGKAPNVQPPDATVNNPPADLFTRAGWADFTS
GFWLGGCGGAVFAWLLVGTLHLNNIMQLIQNIWTTG
>Mature_195_residues
SDSQTPLGANPKFPEKYIDQSVLPTDIGIAEQWAVKTVADPFVGNLATPVNSGYFTKVFINNLPFYREGISPNFRGLETG
AALGYLLYGPFTMTGPLRNSDFALTAGLLAAIGAVHILTALLVLYNAPGKAPNVQPPDATVNNPPADLFTRAGWADFTSG
FWLGGCGGAVFAWLLVGTLHLNNIMQLIQNIWTTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psaL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003757
- InterPro:   IPR022980
- ProDom:   PD005947 [H]

Pfam domain/function: PF02605 PsaL [H]

EC number: NA

Molecular weight: Translated: 20930; Mature: 20799

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSQTPLGANPKFPEKYIDQSVLPTDIGIAEQWAVKTVADPFVGNLATPVNSGYFTKVF
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHH
INNLPFYREGISPNFRGLETGAALGYLLYGPFTMTGPLRNSDFALTAGLLAAIGAVHILT
HHCCCHHHCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH
ALLVLYNAPGKAPNVQPPDATVNNPPADLFTRAGWADFTSGFWLGGCGGAVFAWLLVGTL
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCEECCHHHHHHHHHHHHHH
HLNNIMQLIQNIWTTG
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDSQTPLGANPKFPEKYIDQSVLPTDIGIAEQWAVKTVADPFVGNLATPVNSGYFTKVF
CCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHH
INNLPFYREGISPNFRGLETGAALGYLLYGPFTMTGPLRNSDFALTAGLLAAIGAVHILT
HHCCCHHHCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH
ALLVLYNAPGKAPNVQPPDATVNNPPADLFTRAGWADFTSGFWLGGCGGAVFAWLLVGTL
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCEECCHHHHHHHHHHHHHH
HLNNIMQLIQNIWTTG
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA