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The map label for this gene is yafL [C]

Identifier: 78779994

GI number: 78779994

Start: 1509285

End: 1510043

Strand: Direct

Name: yafL [C]

Synonym: PMT9312_1610

Alternate gene names: 78779994

Gene position: 1509285-1510043 (Clockwise)

Preceding gene: 78779992

Following gene: 78779997

Centisome position: 88.3

GC content: 29.12

Gene sequence:

>759_bases
ATGGAAAATTATAAAGACCCTATCTCACTATTTAAACAAACAAATTTTTCAAAGACTATTTGGTGGAAATTAAAAGTTAA
TATTTCTGGATATCAAAATGAAAAAGAAAATAAGTTAGTGACAGAAATTTGTAAAAATAGAATTTTTAGACTACTTTACC
CAAATATTCATCAACGTACCCATAAATTTTCAAGGATTTTAGTTCAACTATATGAAGATGGTTACGTCTGTTGGATAAAT
TTGGATGAATTGATTATTGAGAAAAGCGAATTAAGAAAAACTGAGAATTTTAAAAATGAACACTTCTTTATAAAAGATAA
AGTTCCCTTAATTATAAAATGGATACAAAAACAATCTGAGTTAACGAATGAATATCTTTGGGGAGGTACATTAGGACCCA
ATTTTGATTGTTCCGGATTAATTCAGACTGCTTTCTTCATACATCATATTCATATTCCTAGAGACTCTTTTCAAATAAAA
AGTTTTTGTAAACACCTTTTTTATTTCAAAGAATCTTATGCAGCTCTTCAACCAGGAGATCTTTTGTTTTTTGGAAATAA
AGAAAAATGTGACCATATAGGAATCTACAAAGGAGATGGGTTATATTACCATAGCTCTGGAAAGGAGTTTGGAAGAAATG
GAATAGGATTAGATAGTTTCAAAGAGACTAATGACCCAATTTCATTGCATTATAAATCCAAACTAATCTCAGCCGGAAGA
GTCGTAAGAAATTATAGGTGGGATAGAAGTATTAGATAG

Upstream 100 bases:

>100_bases
TATCTTCTCTTAAAAAATCTTTATTATAAGAGCATACCCTCCCTAAAATATCATTTAAGGCTAGACCCATCTCTTTACTT
ACATAGTAGAAGGACATTTT

Downstream 100 bases:

>100_bases
CAGTCTTTTAATTAAATTAAAATATAAGACCTTCTTTAAATTTTAAAATTAACCAGTAGTCCAAATATTCTGAATTAGTT
GCATTATGTTGTTCAAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MENYKDPISLFKQTNFSKTIWWKLKVNISGYQNEKENKLVTEICKNRIFRLLYPNIHQRTHKFSRILVQLYEDGYVCWIN
LDELIIEKSELRKTENFKNEHFFIKDKVPLIIKWIQKQSELTNEYLWGGTLGPNFDCSGLIQTAFFIHHIHIPRDSFQIK
SFCKHLFYFKESYAALQPGDLLFFGNKEKCDHIGIYKGDGLYYHSSGKEFGRNGIGLDSFKETNDPISLHYKSKLISAGR
VVRNYRWDRSIR

Sequences:

>Translated_252_residues
MENYKDPISLFKQTNFSKTIWWKLKVNISGYQNEKENKLVTEICKNRIFRLLYPNIHQRTHKFSRILVQLYEDGYVCWIN
LDELIIEKSELRKTENFKNEHFFIKDKVPLIIKWIQKQSELTNEYLWGGTLGPNFDCSGLIQTAFFIHHIHIPRDSFQIK
SFCKHLFYFKESYAALQPGDLLFFGNKEKCDHIGIYKGDGLYYHSSGKEFGRNGIGLDSFKETNDPISLHYKSKLISAGR
VVRNYRWDRSIR
>Mature_252_residues
MENYKDPISLFKQTNFSKTIWWKLKVNISGYQNEKENKLVTEICKNRIFRLLYPNIHQRTHKFSRILVQLYEDGYVCWIN
LDELIIEKSELRKTENFKNEHFFIKDKVPLIIKWIQKQSELTNEYLWGGTLGPNFDCSGLIQTAFFIHHIHIPRDSFQIK
SFCKHLFYFKESYAALQPGDLLFFGNKEKCDHIGIYKGDGLYYHSSGKEFGRNGIGLDSFKETNDPISLHYKSKLISAGR
VVRNYRWDRSIR

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29950; Mature: 29950

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENYKDPISLFKQTNFSKTIWWKLKVNISGYQNEKENKLVTEICKNRIFRLLYPNIHQRT
CCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
HKFSRILVQLYEDGYVCWINLDELIIEKSELRKTENFKNEHFFIKDKVPLIIKWIQKQSE
HHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH
LTNEYLWGGTLGPNFDCSGLIQTAFFIHHIHIPRDSFQIKSFCKHLFYFKESYAALQPGD
HHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC
LLFFGNKEKCDHIGIYKGDGLYYHSSGKEFGRNGIGLDSFKETNDPISLHYKSKLISAGR
EEEECCCCCCCCCCEEECCCEEEECCCHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH
VVRNYRWDRSIR
HHHHCCCCCCCC
>Mature Secondary Structure
MENYKDPISLFKQTNFSKTIWWKLKVNISGYQNEKENKLVTEICKNRIFRLLYPNIHQRT
CCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
HKFSRILVQLYEDGYVCWINLDELIIEKSELRKTENFKNEHFFIKDKVPLIIKWIQKQSE
HHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH
LTNEYLWGGTLGPNFDCSGLIQTAFFIHHIHIPRDSFQIKSFCKHLFYFKESYAALQPGD
HHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC
LLFFGNKEKCDHIGIYKGDGLYYHSSGKEFGRNGIGLDSFKETNDPISLHYKSKLISAGR
EEEECCCCCCCCCCEEECCCEEEECCCHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH
VVRNYRWDRSIR
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA