Click here to switch to the map view.

The map label for this gene is 78779934

Identifier: 78779934

GI number: 78779934

Start: 1443501

End: 1443977

Strand: Reverse

Name: 78779934

Synonym: PMT9312_1550

Alternate gene names: NA

Gene position: 1443977-1443501 (Counterclockwise)

Preceding gene: 78779938

Following gene: 78779933

Centisome position: 84.48

GC content: 29.98

Gene sequence:

>477_bases
ATGTTCACATCAGTGGACTCAAATAGAAAAAAACTTGAGCATCCTTCCAATAAGAATGTTCAATTTCCTCAATCCCTGAA
TAATTCGATCATTAAAGAAAGTAAATCTGGCATTGCCAATCAAATAGATAATTTGCTTTCTCAAAATGATGAATACACAA
AATTGCAATTAACAATTTTTGGCATTACTTTTATTGTTTCTATTTTATTAGCATCAATAACTGGAATTTTTCTAGGATTT
ACTTTTGGTTTTAGTATTTTTATAGGTGCAATTTCTGGTATTTTTTACTTACGTTTGCTTGCCAAAAGTATAGGGAAACT
TGGTAAAGAATCATCAGGTGTATCAAAATTGCAACTTTTAGTTCCAGTTTGCCTCTTTATTTTTGCGAGCAAGCTAGGAT
CTTTGGATATTTTTCCTGCAATGATAGGTTTTTTCATTTATAAGCCTTCACTCATTCTTTATTTTTCACGTTCTTAA

Upstream 100 bases:

>100_bases
AATTTTTTGTAGAAAAAAACTAGCTAAAAGGTACCTCTCCGTGATAGATTCCGTGAGTTTATATACTTACTTCAAACCAT
TCAGAGAGGATTTCTAAACT

Downstream 100 bases:

>100_bases
GTAAATTTTTTTATTCAAAACAAATGCTTTTTAATTCCTTGCTAACAAATTTTGCAGCATTAGAAGTTGGTCAACATCTT
TATTGGCAAATTGGAAATAT

Product: ATP synthase subunit 1-like

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MFTSVDSNRKKLEHPSNKNVQFPQSLNNSIIKESKSGIANQIDNLLSQNDEYTKLQLTIFGITFIVSILLASITGIFLGF
TFGFSIFIGAISGIFYLRLLAKSIGKLGKESSGVSKLQLLVPVCLFIFASKLGSLDIFPAMIGFFIYKPSLILYFSRS

Sequences:

>Translated_158_residues
MFTSVDSNRKKLEHPSNKNVQFPQSLNNSIIKESKSGIANQIDNLLSQNDEYTKLQLTIFGITFIVSILLASITGIFLGF
TFGFSIFIGAISGIFYLRLLAKSIGKLGKESSGVSKLQLLVPVCLFIFASKLGSLDIFPAMIGFFIYKPSLILYFSRS
>Mature_158_residues
MFTSVDSNRKKLEHPSNKNVQFPQSLNNSIIKESKSGIANQIDNLLSQNDEYTKLQLTIFGITFIVSILLASITGIFLGF
TFGFSIFIGAISGIFYLRLLAKSIGKLGKESSGVSKLQLLVPVCLFIFASKLGSLDIFPAMIGFFIYKPSLILYFSRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17460; Mature: 17460

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTSVDSNRKKLEHPSNKNVQFPQSLNNSIIKESKSGIANQIDNLLSQNDEYTKLQLTIF
CCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHH
GITFIVSILLASITGIFLGFTFGFSIFIGAISGIFYLRLLAKSIGKLGKESSGVSKLQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VPVCLFIFASKLGSLDIFPAMIGFFIYKPSLILYFSRS
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MFTSVDSNRKKLEHPSNKNVQFPQSLNNSIIKESKSGIANQIDNLLSQNDEYTKLQLTIF
CCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHH
GITFIVSILLASITGIFLGFTFGFSIFIGAISGIFYLRLLAKSIGKLGKESSGVSKLQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VPVCLFIFASKLGSLDIFPAMIGFFIYKPSLILYFSRS
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA