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The map label for this gene is yfjD [C]

Identifier: 78779920

GI number: 78779920

Start: 1432118

End: 1433095

Strand: Direct

Name: yfjD [C]

Synonym: PMT9312_1536

Alternate gene names: 78779920

Gene position: 1432118-1433095 (Clockwise)

Preceding gene: 78779916

Following gene: 78779921

Centisome position: 83.79

GC content: 33.44

Gene sequence:

>978_bases
ATGGAACCAAGTGTTTACGGTTTAATTTTACTTATAATTATCATTTTAATTGGATCAGCATGTTGTTCGGGAGTCGAAGC
AGCTTTTTTAGCCGTAAATTCAATTAGAATTATAGAAATAGCCTCAAGACAAAAGCCAAAAAGTTCCGCAAATCAACTCC
TTAAACTTAGGAAACATCTTGGAAGGACATTAACTGTAATTACTATTACTAATAATGGATTTAACATCATTGGAAGTCTA
ATTTTAGGTGTATACGGAGCATTGGTAATACATAGCAGTTATGGCTTAACCCTTTTTTCAATTGCTTTTTATATACTAGT
TGTCTTAGTGGGAGAAGTACTACCCAAAGCTCTTGGTACAAGATTTTCAGTCCAAATAGCATTGTTATCCGTTCCAATCC
TGAGAATATTAAATTCTTTAATGAAGCCGTTCTTAATATTAATAGAGCAAATATTTCCAGTTATTACCGCAGAAAATGAA
ATTTCAACTGATGAAGAAGAAATTAGGCAAATGGCAAAAATTGGTAGTCAGAAAGGTTTCATAGAAGCTGATGAGGCAGC
AATGATATTTAAGGTTTTTCAATTAAATGATTTAAAAGCTAAAGATTTAATGATCCCAAGGGTATCAGCACCCTGTCTTG
ATGGGTCTTCGAATCTTGATGAAATTTCAAAACTAATAATGTCTGACAACTCTCCTTGGTGGGTTATTTTGGGAGATAAA
GTTGACAAAATACAAGGGGTAGTTAAACGTGAAAGCATGTTAGCAGAATTAATAAATGGGGGAAATAAAAAATCATTATC
AGAAATCTGCGAACCTGTCGAATATATTCCCGAAATGATTAAGGCAGATCAATTATTAACAAGATTTGACAAGAATCATA
AAGGAGTAAAAGTAGTAGTAGATGAATTTGGGGGATTCGTGGGAATTATTGGTGCGGAAGCTGTGTTAGCTGTATTAGCT
GGTTGGTGGAAAAAATAA

Upstream 100 bases:

>100_bases
AAAACTTTATTGTCAGGTTTAAACATAAAATGTGTATTGGCGTATTTTAAAAAAAAATGGAAGAATGAATTAAAAAAGAT
TTATTTCCTAATCTATTTTA

Downstream 100 bases:

>100_bases
ATTATGCAAAAATTGAAAATTAATAAAAATTATTTACTTTTAAAAAATTGGTGGGAGACTATTGACCTTAGCAACTATGA
AAAAAGTTTTTTTAATAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MEPSVYGLILLIIIILIGSACCSGVEAAFLAVNSIRIIEIASRQKPKSSANQLLKLRKHLGRTLTVITITNNGFNIIGSL
ILGVYGALVIHSSYGLTLFSIAFYILVVLVGEVLPKALGTRFSVQIALLSVPILRILNSLMKPFLILIEQIFPVITAENE
ISTDEEEIRQMAKIGSQKGFIEADEAAMIFKVFQLNDLKAKDLMIPRVSAPCLDGSSNLDEISKLIMSDNSPWWVILGDK
VDKIQGVVKRESMLAELINGGNKKSLSEICEPVEYIPEMIKADQLLTRFDKNHKGVKVVVDEFGGFVGIIGAEAVLAVLA
GWWKK

Sequences:

>Translated_325_residues
MEPSVYGLILLIIIILIGSACCSGVEAAFLAVNSIRIIEIASRQKPKSSANQLLKLRKHLGRTLTVITITNNGFNIIGSL
ILGVYGALVIHSSYGLTLFSIAFYILVVLVGEVLPKALGTRFSVQIALLSVPILRILNSLMKPFLILIEQIFPVITAENE
ISTDEEEIRQMAKIGSQKGFIEADEAAMIFKVFQLNDLKAKDLMIPRVSAPCLDGSSNLDEISKLIMSDNSPWWVILGDK
VDKIQGVVKRESMLAELINGGNKKSLSEICEPVEYIPEMIKADQLLTRFDKNHKGVKVVVDEFGGFVGIIGAEAVLAVLA
GWWKK
>Mature_325_residues
MEPSVYGLILLIIIILIGSACCSGVEAAFLAVNSIRIIEIASRQKPKSSANQLLKLRKHLGRTLTVITITNNGFNIIGSL
ILGVYGALVIHSSYGLTLFSIAFYILVVLVGEVLPKALGTRFSVQIALLSVPILRILNSLMKPFLILIEQIFPVITAENE
ISTDEEEIRQMAKIGSQKGFIEADEAAMIFKVFQLNDLKAKDLMIPRVSAPCLDGSSNLDEISKLIMSDNSPWWVILGDK
VDKIQGVVKRESMLAELINGGNKKSLSEICEPVEYIPEMIKADQLLTRFDKNHKGVKVVVDEFGGFVGIIGAEAVLAVLA
GWWKK

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=320, Percent_Identity=26.5625, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI145693175, Length=312, Percent_Identity=23.7179487179487, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786879, Length=179, Percent_Identity=26.2569832402235, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 35607; Mature: 35607

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPSVYGLILLIIIILIGSACCSGVEAAFLAVNSIRIIEIASRQKPKSSANQLLKLRKHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHC
GRTLTVITITNNGFNIIGSLILGVYGALVIHSSYGLTLFSIAFYILVVLVGEVLPKALGT
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RFSVQIALLSVPILRILNSLMKPFLILIEQIFPVITAENEISTDEEEIRQMAKIGSQKGF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
IEADEAAMIFKVFQLNDLKAKDLMIPRVSAPCLDGSSNLDEISKLIMSDNSPWWVILGDK
CCCCCHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCH
VDKIQGVVKRESMLAELINGGNKKSLSEICEPVEYIPEMIKADQLLTRFDKNHKGVKVVV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEH
DEFGGFVGIIGAEAVLAVLAGWWKK
HHHCCCEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEPSVYGLILLIIIILIGSACCSGVEAAFLAVNSIRIIEIASRQKPKSSANQLLKLRKHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHC
GRTLTVITITNNGFNIIGSLILGVYGALVIHSSYGLTLFSIAFYILVVLVGEVLPKALGT
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RFSVQIALLSVPILRILNSLMKPFLILIEQIFPVITAENEISTDEEEIRQMAKIGSQKGF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
IEADEAAMIFKVFQLNDLKAKDLMIPRVSAPCLDGSSNLDEISKLIMSDNSPWWVILGDK
CCCCCHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCH
VDKIQGVVKRESMLAELINGGNKKSLSEICEPVEYIPEMIKADQLLTRFDKNHKGVKVVV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEH
DEFGGFVGIIGAEAVLAVLAGWWKK
HHHCCCEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]