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The map label for this gene is 78779866

Identifier: 78779866

GI number: 78779866

Start: 1390447

End: 1391649

Strand: Direct

Name: 78779866

Synonym: PMT9312_1482

Alternate gene names: NA

Gene position: 1390447-1391649 (Clockwise)

Preceding gene: 78779864

Following gene: 78779868

Centisome position: 81.35

GC content: 31.17

Gene sequence:

>1203_bases
TTGAAACTTTCAAATCAATCCCTAATTAAAAAAACTATTTCCAAAATAATTACTCCTTGGTATGCAATAGCTTTAATAGA
TAGATGGTTATTAGGTCAAATAATACCTCCAATGTTATTTGCCATTTCTGCTTTTACTGTGATTTCTCTTTCAGTGGGTG
TAATGTTTGATTTGATAAGAAAAATAGTTGAATATGGCTTACCTGTATTAAAAGCTTTACAAGCTTTAATTTATAGCCTT
CCTAGCTTTTTAGTTTTATCATTTCCTATGGCTGTATTATTGTCCACACTATTATCTTATGGAAAGCTATCAGCCAATTC
TGAATTATTAGCTTTAAGGTCATTAGGAATTAAAACCTCTCGGATCATAGCTCCGGCCATTGCAGTTTCAATATTCATGA
CAGGATTAACTTTTTATTTCAATGATAATCTAGTTCCCAATAGTAATAAGCTTGCTGAATTGACATTGAGATCAGGAGTA
GGAAGTTCTTTTAATAGAGAAAAATCTAAAAATAACATTATTTTTTCTAGAAAAGGATCAAGAATAGATACTAATAATAA
GCCAACAAAAACAAATACTTTCCTAACTCATATTTTCTACGCTTCGCGTTTTGAAAACAATACTATGAGGGAAGTTACAG
TTTTAGACTTTTCCAGAGTAAATATAAAGCAAATTCTCACTGCAAAAAGTGCCGTATTTGATAAAAAAAACTCTTCCTGG
GTATTCGCAGATGGGAGTATTGTCTCAACTGACTCTACTGGTCAAACAACAAGTATTAATTTCAAACAATATTTATATCC
CTTTGTTGAAGGCCCATTAGATCTTGCAAGAGTTCCAAAGGATGCAAGCGATATGTCTTTAAAAGAAGCTTTAGAGGCAG
AAAGAATATATAAAAAGATAGGAGATCTGAAGCAGATTAGAAAGATTCAAGTACGAATCCAAGAAAAATTTACTTTACCT
TGTGCATGTTTGGTCTTTGGATTGATAGGTAGTATTTTGGGATCTCAATCTAATTTAAGATCTTCAAAAAGTCAGGGTTT
TGGATTGAGTGTAATTCTGATATTAATGTATTATGTGATTTCATTTATATGCAGTTCTTTTGGGGTCAAGGGATTACTTC
CTCCAATAATTGCAGCTTGGTTTCCAGTAATAATTTCTCTTTCTGGTGGATTTTATTTCTTAAGAAATTCAAATTATAAA
TGA

Upstream 100 bases:

>100_bases
AATATAAAAATTTCTTCTTAACCACAAATCGCATATTGGTTTCTAAATCTTTAATATTTTATAATGAAATAAAAGATCGT
ACAAATTAAATAAACTCCTT

Downstream 100 bases:

>100_bases
TCTTTTATTTATACAATTAGACTATTCTATTTAGTGGAAACATTAGCAAACTTATCTATGAATTAAAAGGTTCCATCCTT
TGTTAAATCTTATCTATTCT

Product: putative permease

Products: NA

Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Protein; Unclassified ABC-Type Transport System Permease; Permease Family Protein; YjgP/YjgQ Permease Superfamily; YjgP/YjgQ Family Permease; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Permease; YjgP/YjgQ Family Membrane Protein

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MKLSNQSLIKKTISKIITPWYAIALIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPVLKALQALIYSL
PSFLVLSFPMAVLLSTLLSYGKLSANSELLALRSLGIKTSRIIAPAIAVSIFMTGLTFYFNDNLVPNSNKLAELTLRSGV
GSSFNREKSKNNIIFSRKGSRIDTNNKPTKTNTFLTHIFYASRFENNTMREVTVLDFSRVNIKQILTAKSAVFDKKNSSW
VFADGSIVSTDSTGQTTSINFKQYLYPFVEGPLDLARVPKDASDMSLKEALEAERIYKKIGDLKQIRKIQVRIQEKFTLP
CACLVFGLIGSILGSQSNLRSSKSQGFGLSVILILMYYVISFICSSFGVKGLLPPIIAAWFPVIISLSGGFYFLRNSNYK

Sequences:

>Translated_400_residues
MKLSNQSLIKKTISKIITPWYAIALIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPVLKALQALIYSL
PSFLVLSFPMAVLLSTLLSYGKLSANSELLALRSLGIKTSRIIAPAIAVSIFMTGLTFYFNDNLVPNSNKLAELTLRSGV
GSSFNREKSKNNIIFSRKGSRIDTNNKPTKTNTFLTHIFYASRFENNTMREVTVLDFSRVNIKQILTAKSAVFDKKNSSW
VFADGSIVSTDSTGQTTSINFKQYLYPFVEGPLDLARVPKDASDMSLKEALEAERIYKKIGDLKQIRKIQVRIQEKFTLP
CACLVFGLIGSILGSQSNLRSSKSQGFGLSVILILMYYVISFICSSFGVKGLLPPIIAAWFPVIISLSGGFYFLRNSNYK
>Mature_400_residues
MKLSNQSLIKKTISKIITPWYAIALIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPVLKALQALIYSL
PSFLVLSFPMAVLLSTLLSYGKLSANSELLALRSLGIKTSRIIAPAIAVSIFMTGLTFYFNDNLVPNSNKLAELTLRSGV
GSSFNREKSKNNIIFSRKGSRIDTNNKPTKTNTFLTHIFYASRFENNTMREVTVLDFSRVNIKQILTAKSAVFDKKNSSW
VFADGSIVSTDSTGQTTSINFKQYLYPFVEGPLDLARVPKDASDMSLKEALEAERIYKKIGDLKQIRKIQVRIQEKFTLP
CACLVFGLIGSILGSQSNLRSSKSQGFGLSVILILMYYVISFICSSFGVKGLLPPIIAAWFPVIISLSGGFYFLRNSNYK

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44480; Mature: 44480

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSNQSLIKKTISKIITPWYAIALIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIVEYGLPVLKALQALIYSLPSFLVLSFPMAVLLSTLLSYGKLSANSELLALRSLGIKTS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHH
RIIAPAIAVSIFMTGLTFYFNDNLVPNSNKLAELTLRSGVGSSFNREKSKNNIIFSRKGS
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCC
RIDTNNKPTKTNTFLTHIFYASRFENNTMREVTVLDFSRVNIKQILTAKSAVFDKKNSSW
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCE
VFADGSIVSTDSTGQTTSINFKQYLYPFVEGPLDLARVPKDASDMSLKEALEAERIYKKI
EEECCCEEECCCCCCEEEECHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH
GDLKQIRKIQVRIQEKFTLPCACLVFGLIGSILGSQSNLRSSKSQGFGLSVILILMYYVI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHH
SFICSSFGVKGLLPPIIAAWFPVIISLSGGFYFLRNSNYK
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
>Mature Secondary Structure
MKLSNQSLIKKTISKIITPWYAIALIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIVEYGLPVLKALQALIYSLPSFLVLSFPMAVLLSTLLSYGKLSANSELLALRSLGIKTS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHH
RIIAPAIAVSIFMTGLTFYFNDNLVPNSNKLAELTLRSGVGSSFNREKSKNNIIFSRKGS
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCC
RIDTNNKPTKTNTFLTHIFYASRFENNTMREVTVLDFSRVNIKQILTAKSAVFDKKNSSW
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCE
VFADGSIVSTDSTGQTTSINFKQYLYPFVEGPLDLARVPKDASDMSLKEALEAERIYKKI
EEECCCEEECCCCCCEEEECHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH
GDLKQIRKIQVRIQEKFTLPCACLVFGLIGSILGSQSNLRSSKSQGFGLSVILILMYYVI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHH
SFICSSFGVKGLLPPIIAAWFPVIISLSGGFYFLRNSNYK
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA