Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

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The map label for this gene is 78779859

Identifier: 78779859

GI number: 78779859

Start: 1384500

End: 1384652

Strand: Direct

Name: 78779859

Synonym: PMT9312_1475

Alternate gene names: NA

Gene position: 1384500-1384652 (Clockwise)

Preceding gene: 78779858

Following gene: 78779860

Centisome position: 81.0

GC content: 28.1

Gene sequence:

>153_bases
ATGAATAAAAAAAATTCCCCACAAAGGAAAACAACTTTAAAATGGAATTCCAATGGAGAGCTTTCGGAAATTGATATGTT
AAGAATTTTAGATAAAATATCATCTAGTGATCTTAATCAATGTGAATTGACATGCGATTCTGATCAAGTTTAA

Upstream 100 bases:

>100_bases
AATTCATATTTTGAATGTATTACTGAATGCAGTATTGTGGATGGTCATCAAGAATGCATTACTCGTTGTTTAGAAATTCA
TTTAAAGGGAGGGGACCAAA

Downstream 100 bases:

>100_bases
AAATTATTTTTTCTATAACTTTTTAAATTAATAAATTATTAATTACGCAATTAAATTTAACCCTATTATCAAAAGAAAAA
CATTTTTATTTATTACCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 50; Mature: 50

Protein sequence:

>50_residues
MNKKNSPQRKTTLKWNSNGELSEIDMLRILDKISSSDLNQCELTCDSDQV

Sequences:

>Translated_50_residues
MNKKNSPQRKTTLKWNSNGELSEIDMLRILDKISSSDLNQCELTCDSDQV
>Mature_50_residues
MNKKNSPQRKTTLKWNSNGELSEIDMLRILDKISSSDLNQCELTCDSDQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5728; Mature: 5728

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKNSPQRKTTLKWNSNGELSEIDMLRILDKISSSDLNQCELTCDSDQV
CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MNKKNSPQRKTTLKWNSNGELSEIDMLRILDKISSSDLNQCELTCDSDQV
CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA