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The map label for this gene is 78779832

Identifier: 78779832

GI number: 78779832

Start: 1360908

End: 1361468

Strand: Direct

Name: 78779832

Synonym: PMT9312_1448

Alternate gene names: NA

Gene position: 1360908-1361468 (Clockwise)

Preceding gene: 78779831

Following gene: 78779837

Centisome position: 79.62

GC content: 34.4

Gene sequence:

>561_bases
ATGTTGATCGAAATGGTTTCTATTTTTTCATCACTACATAAGTCTTTTAAAAGACTTTTAATTTTTCTTCCATTGATTAT
TGGTTTACTTCTTAATCCAATTTCTACTAATGCACTTTATCCTAGTGATCCTTCATCAGTAGATGGATTGAAAGAAGATC
TTCATGGTGCAGATCTTCAAAATAATGAATTTGTAAAATATGATTTATCTAATCAAGATTTAGGAGAGGCAAATCTACAA
GGCGCCTATATGAGCGTAACAACTGCAGCAAATTCTAGTTTCAAAAGCGCGAACATGAAAGATCTTATTGCATATGCTGT
ACGTTTTGATAATGCTGATTTATCTGATGCAAATCTTACTAATGGTGAGCTGATGAAAAGTGTTTTTGATGGGGCAACTA
TAGATGGAGCAGACTTTACTGATGCAACTCTTGATCTTCCTCAGAGGAAATCATTATGTGAAAGAGCAACAGGTACTAAC
TCAAAAACTGGAGTGGACACAGTAGATAGTCTTGAATGTTCAGGCTTAAGAGGTTATATACCTGCAACACCAGAAGCTTA
A

Upstream 100 bases:

>100_bases
ATTTTCTGGTGGCAGATATTAAATAAACTGCAACAGTTCGTTAGCAGGAGCGTTGTAAATGACCAACCCATGAAATAATA
GTCATAGGTTTTTCTATTTG

Downstream 100 bases:

>100_bases
TTAGAAACTAATTTTTAATTATGGTGAAACATTACCAGGCTCTTGTGAGCCTGGTTTTTTGCTATACCACCATTCTTGTA
TATCAGAAGAAAATTTCTTT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Secreted Pentapeptide Repeats Protein; Pentapeptide Repeat Family Protein

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MLIEMVSIFSSLHKSFKRLLIFLPLIIGLLLNPISTNALYPSDPSSVDGLKEDLHGADLQNNEFVKYDLSNQDLGEANLQ
GAYMSVTTAANSSFKSANMKDLIAYAVRFDNADLSDANLTNGELMKSVFDGATIDGADFTDATLDLPQRKSLCERATGTN
SKTGVDTVDSLECSGLRGYIPATPEA

Sequences:

>Translated_186_residues
MLIEMVSIFSSLHKSFKRLLIFLPLIIGLLLNPISTNALYPSDPSSVDGLKEDLHGADLQNNEFVKYDLSNQDLGEANLQ
GAYMSVTTAANSSFKSANMKDLIAYAVRFDNADLSDANLTNGELMKSVFDGATIDGADFTDATLDLPQRKSLCERATGTN
SKTGVDTVDSLECSGLRGYIPATPEA
>Mature_186_residues
MLIEMVSIFSSLHKSFKRLLIFLPLIIGLLLNPISTNALYPSDPSSVDGLKEDLHGADLQNNEFVKYDLSNQDLGEANLQ
GAYMSVTTAANSSFKSANMKDLIAYAVRFDNADLSDANLTNGELMKSVFDGATIDGADFTDATLDLPQRKSLCERATGTN
SKTGVDTVDSLECSGLRGYIPATPEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20035; Mature: 20035

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIEMVSIFSSLHKSFKRLLIFLPLIIGLLLNPISTNALYPSDPSSVDGLKEDLHGADLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
NNEFVKYDLSNQDLGEANLQGAYMSVTTAANSSFKSANMKDLIAYAVRFDNADLSDANLT
CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
NGELMKSVFDGATIDGADFTDATLDLPQRKSLCERATGTNSKTGVDTVDSLECSGLRGYI
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PATPEA
CCCCCC
>Mature Secondary Structure
MLIEMVSIFSSLHKSFKRLLIFLPLIIGLLLNPISTNALYPSDPSSVDGLKEDLHGADLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
NNEFVKYDLSNQDLGEANLQGAYMSVTTAANSSFKSANMKDLIAYAVRFDNADLSDANLT
CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
NGELMKSVFDGATIDGADFTDATLDLPQRKSLCERATGTNSKTGVDTVDSLECSGLRGYI
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PATPEA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA