| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779808
Identifier: 78779808
GI number: 78779808
Start: 1337536
End: 1338546
Strand: Direct
Name: 78779808
Synonym: PMT9312_1424
Alternate gene names: NA
Gene position: 1337536-1338546 (Clockwise)
Preceding gene: 78779807
Following gene: 78779809
Centisome position: 78.25
GC content: 31.85
Gene sequence:
>1011_bases ATGACCAATACAGAAATTTCAAACAATAATCCTGAAAAGGAATTAATAATAGGTAAGTCAATTTCAGATGATAAAACTAA ACAAATTAGTAAGAAAAACACAACGCAAAATAAAAAGATTGCTCCAAAAAGCGACAAAACGAACAAATCTTTTGATGAAA TTTCTAATGAGATTTTTAGCGATCTCACTACAAAAAAAGATTGTTTACTTAAAGAAATTAAAGAGTTAGAAACAAAAAAA AATGAATTAGAAAAAGATATTGAGTCAAATTTTAAAGGACAATCAGATAATATCGCTAAAAGAGTTAAAGGCTTTCAAGA GTACTTAACTGGGGCTTTGCAGAATCTTTCACACAACGTAGAGAAACTAGAATTAGTTTCTCAACCAATAATCGTAAAGC CATCTCCCCTAGATGAAAAAAAACAAGAAAATAGTACAAATAATATGATGAATGTTCCTGCTCTTTCAGAAACATTTAAG CCAGATGAAAAGATTATTAAAAGTTGCTTTTCAACTTTTACAGAACAACCTGATTTTTATGCTGAACCTTGGAAATTAAG ACGTAGTCTTGATTCATCAGATATAGAAATTATGGATGATTGGTTCTTTAACATGGGAGGGAGAGGTTCTCTTGAAAGTA GAGGATCTCGACAAAAAAATGCATTATTATCAGCGGGTTTAATATCTATTCTTGGCGAATTATATGGAGATCAGTTTCAG ACTCTTATTTTAGCTTCGCAGCCTGAACGATTAGGAGAATGGAGAAGAATTCTCCAAGATTCACTTGGTCTCACAAGAGA TGACTTTGGACCTAATAGTGGGATTGTTCTTTTTGAAAGGCCTGAAGGTGTCATCGAAAGAGCTGATAGATTAGAAGCTA ATGAAGAATTACCATTTATTATTATTGATGCAGCAGAAACATCTGTTGAAATTCCAATACTTCAATTCCCATTATGGATT GCATTTGCTGGCTCAGATAATGAAATTTACGATGATCTTGAACTAAACTAA
Upstream 100 bases:
>100_bases ATCCAAAGCAATTAAAAGATGAACTTTTAAAAAAAGTTGACTCCCTGGAAATTAAAAATTCCTAAAATTCACTGTTTGCT TAATCATCAAAATTATTTAA
Downstream 100 bases:
>100_bases TTCTTATGAATATTTTAATAATTTTTGTAAGTTATCTTTTAGGATCACTTCCCACAGGTTTTTTAATTGGGAAATATCTT AAAAATATAGATCTAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTNTEISNNNPEKELIIGKSISDDKTKQISKKNTTQNKKIAPKSDKTNKSFDEISNEIFSDLTTKKDCLLKEIKELETKK NELEKDIESNFKGQSDNIAKRVKGFQEYLTGALQNLSHNVEKLELVSQPIIVKPSPLDEKKQENSTNNMMNVPALSETFK PDEKIIKSCFSTFTEQPDFYAEPWKLRRSLDSSDIEIMDDWFFNMGGRGSLESRGSRQKNALLSAGLISILGELYGDQFQ TLILASQPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERPEGVIERADRLEANEELPFIIIDAAETSVEIPILQFPLWI AFAGSDNEIYDDLELN
Sequences:
>Translated_336_residues MTNTEISNNNPEKELIIGKSISDDKTKQISKKNTTQNKKIAPKSDKTNKSFDEISNEIFSDLTTKKDCLLKEIKELETKK NELEKDIESNFKGQSDNIAKRVKGFQEYLTGALQNLSHNVEKLELVSQPIIVKPSPLDEKKQENSTNNMMNVPALSETFK PDEKIIKSCFSTFTEQPDFYAEPWKLRRSLDSSDIEIMDDWFFNMGGRGSLESRGSRQKNALLSAGLISILGELYGDQFQ TLILASQPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERPEGVIERADRLEANEELPFIIIDAAETSVEIPILQFPLWI AFAGSDNEIYDDLELN >Mature_335_residues TNTEISNNNPEKELIIGKSISDDKTKQISKKNTTQNKKIAPKSDKTNKSFDEISNEIFSDLTTKKDCLLKEIKELETKKN ELEKDIESNFKGQSDNIAKRVKGFQEYLTGALQNLSHNVEKLELVSQPIIVKPSPLDEKKQENSTNNMMNVPALSETFKP DEKIIKSCFSTFTEQPDFYAEPWKLRRSLDSSDIEIMDDWFFNMGGRGSLESRGSRQKNALLSAGLISILGELYGDQFQT LILASQPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERPEGVIERADRLEANEELPFIIIDAAETSVEIPILQFPLWIA FAGSDNEIYDDLELN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38133; Mature: 38002
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTEISNNNPEKELIIGKSISDDKTKQISKKNTTQNKKIAPKSDKTNKSFDEISNEIFS CCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH DLTTKKDCLLKEIKELETKKNELEKDIESNFKGQSDNIAKRVKGFQEYLTGALQNLSHNV HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EKLELVSQPIIVKPSPLDEKKQENSTNNMMNVPALSETFKPDEKIIKSCFSTFTEQPDFY HHHHHHCCCEEECCCCCCHHHHCCCCCCEEECCCCHHHCCCHHHHHHHHHHHHCCCCCCC AEPWKLRRSLDSSDIEIMDDWFFNMGGRGSLESRGSRQKNALLSAGLISILGELYGDQFQ CCHHHHHHHCCCCCCEEHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHH TLILASQPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERPEGVIERADRLEANEELPFI HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCEE IIDAAETSVEIPILQFPLWIAFAGSDNEIYDDLELN EEECCCCCCCCEEEECCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure TNTEISNNNPEKELIIGKSISDDKTKQISKKNTTQNKKIAPKSDKTNKSFDEISNEIFS CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH DLTTKKDCLLKEIKELETKKNELEKDIESNFKGQSDNIAKRVKGFQEYLTGALQNLSHNV HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EKLELVSQPIIVKPSPLDEKKQENSTNNMMNVPALSETFKPDEKIIKSCFSTFTEQPDFY HHHHHHCCCEEECCCCCCHHHHCCCCCCEEECCCCHHHCCCHHHHHHHHHHHHCCCCCCC AEPWKLRRSLDSSDIEIMDDWFFNMGGRGSLESRGSRQKNALLSAGLISILGELYGDQFQ CCHHHHHHHCCCCCCEEHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHH TLILASQPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERPEGVIERADRLEANEELPFI HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCEE IIDAAETSVEIPILQFPLWIAFAGSDNEIYDDLELN EEECCCCCCCCEEEECCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA