Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

Click here to switch to the map view.

The map label for this gene is 78779808

Identifier: 78779808

GI number: 78779808

Start: 1337536

End: 1338546

Strand: Direct

Name: 78779808

Synonym: PMT9312_1424

Alternate gene names: NA

Gene position: 1337536-1338546 (Clockwise)

Preceding gene: 78779807

Following gene: 78779809

Centisome position: 78.25

GC content: 31.85

Gene sequence:

>1011_bases
ATGACCAATACAGAAATTTCAAACAATAATCCTGAAAAGGAATTAATAATAGGTAAGTCAATTTCAGATGATAAAACTAA
ACAAATTAGTAAGAAAAACACAACGCAAAATAAAAAGATTGCTCCAAAAAGCGACAAAACGAACAAATCTTTTGATGAAA
TTTCTAATGAGATTTTTAGCGATCTCACTACAAAAAAAGATTGTTTACTTAAAGAAATTAAAGAGTTAGAAACAAAAAAA
AATGAATTAGAAAAAGATATTGAGTCAAATTTTAAAGGACAATCAGATAATATCGCTAAAAGAGTTAAAGGCTTTCAAGA
GTACTTAACTGGGGCTTTGCAGAATCTTTCACACAACGTAGAGAAACTAGAATTAGTTTCTCAACCAATAATCGTAAAGC
CATCTCCCCTAGATGAAAAAAAACAAGAAAATAGTACAAATAATATGATGAATGTTCCTGCTCTTTCAGAAACATTTAAG
CCAGATGAAAAGATTATTAAAAGTTGCTTTTCAACTTTTACAGAACAACCTGATTTTTATGCTGAACCTTGGAAATTAAG
ACGTAGTCTTGATTCATCAGATATAGAAATTATGGATGATTGGTTCTTTAACATGGGAGGGAGAGGTTCTCTTGAAAGTA
GAGGATCTCGACAAAAAAATGCATTATTATCAGCGGGTTTAATATCTATTCTTGGCGAATTATATGGAGATCAGTTTCAG
ACTCTTATTTTAGCTTCGCAGCCTGAACGATTAGGAGAATGGAGAAGAATTCTCCAAGATTCACTTGGTCTCACAAGAGA
TGACTTTGGACCTAATAGTGGGATTGTTCTTTTTGAAAGGCCTGAAGGTGTCATCGAAAGAGCTGATAGATTAGAAGCTA
ATGAAGAATTACCATTTATTATTATTGATGCAGCAGAAACATCTGTTGAAATTCCAATACTTCAATTCCCATTATGGATT
GCATTTGCTGGCTCAGATAATGAAATTTACGATGATCTTGAACTAAACTAA

Upstream 100 bases:

>100_bases
ATCCAAAGCAATTAAAAGATGAACTTTTAAAAAAAGTTGACTCCCTGGAAATTAAAAATTCCTAAAATTCACTGTTTGCT
TAATCATCAAAATTATTTAA

Downstream 100 bases:

>100_bases
TTCTTATGAATATTTTAATAATTTTTGTAAGTTATCTTTTAGGATCACTTCCCACAGGTTTTTTAATTGGGAAATATCTT
AAAAATATAGATCTAAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTNTEISNNNPEKELIIGKSISDDKTKQISKKNTTQNKKIAPKSDKTNKSFDEISNEIFSDLTTKKDCLLKEIKELETKK
NELEKDIESNFKGQSDNIAKRVKGFQEYLTGALQNLSHNVEKLELVSQPIIVKPSPLDEKKQENSTNNMMNVPALSETFK
PDEKIIKSCFSTFTEQPDFYAEPWKLRRSLDSSDIEIMDDWFFNMGGRGSLESRGSRQKNALLSAGLISILGELYGDQFQ
TLILASQPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERPEGVIERADRLEANEELPFIIIDAAETSVEIPILQFPLWI
AFAGSDNEIYDDLELN

Sequences:

>Translated_336_residues
MTNTEISNNNPEKELIIGKSISDDKTKQISKKNTTQNKKIAPKSDKTNKSFDEISNEIFSDLTTKKDCLLKEIKELETKK
NELEKDIESNFKGQSDNIAKRVKGFQEYLTGALQNLSHNVEKLELVSQPIIVKPSPLDEKKQENSTNNMMNVPALSETFK
PDEKIIKSCFSTFTEQPDFYAEPWKLRRSLDSSDIEIMDDWFFNMGGRGSLESRGSRQKNALLSAGLISILGELYGDQFQ
TLILASQPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERPEGVIERADRLEANEELPFIIIDAAETSVEIPILQFPLWI
AFAGSDNEIYDDLELN
>Mature_335_residues
TNTEISNNNPEKELIIGKSISDDKTKQISKKNTTQNKKIAPKSDKTNKSFDEISNEIFSDLTTKKDCLLKEIKELETKKN
ELEKDIESNFKGQSDNIAKRVKGFQEYLTGALQNLSHNVEKLELVSQPIIVKPSPLDEKKQENSTNNMMNVPALSETFKP
DEKIIKSCFSTFTEQPDFYAEPWKLRRSLDSSDIEIMDDWFFNMGGRGSLESRGSRQKNALLSAGLISILGELYGDQFQT
LILASQPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERPEGVIERADRLEANEELPFIIIDAAETSVEIPILQFPLWIA
FAGSDNEIYDDLELN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38133; Mature: 38002

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTEISNNNPEKELIIGKSISDDKTKQISKKNTTQNKKIAPKSDKTNKSFDEISNEIFS
CCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
DLTTKKDCLLKEIKELETKKNELEKDIESNFKGQSDNIAKRVKGFQEYLTGALQNLSHNV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EKLELVSQPIIVKPSPLDEKKQENSTNNMMNVPALSETFKPDEKIIKSCFSTFTEQPDFY
HHHHHHCCCEEECCCCCCHHHHCCCCCCEEECCCCHHHCCCHHHHHHHHHHHHCCCCCCC
AEPWKLRRSLDSSDIEIMDDWFFNMGGRGSLESRGSRQKNALLSAGLISILGELYGDQFQ
CCHHHHHHHCCCCCCEEHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHH
TLILASQPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERPEGVIERADRLEANEELPFI
HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCEE
IIDAAETSVEIPILQFPLWIAFAGSDNEIYDDLELN
EEECCCCCCCCEEEECCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
TNTEISNNNPEKELIIGKSISDDKTKQISKKNTTQNKKIAPKSDKTNKSFDEISNEIFS
CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
DLTTKKDCLLKEIKELETKKNELEKDIESNFKGQSDNIAKRVKGFQEYLTGALQNLSHNV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EKLELVSQPIIVKPSPLDEKKQENSTNNMMNVPALSETFKPDEKIIKSCFSTFTEQPDFY
HHHHHHCCCEEECCCCCCHHHHCCCCCCEEECCCCHHHCCCHHHHHHHHHHHHCCCCCCC
AEPWKLRRSLDSSDIEIMDDWFFNMGGRGSLESRGSRQKNALLSAGLISILGELYGDQFQ
CCHHHHHHHCCCCCCEEHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHH
TLILASQPERLGEWRRILQDSLGLTRDDFGPNSGIVLFERPEGVIERADRLEANEELPFI
HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCEE
IIDAAETSVEIPILQFPLWIAFAGSDNEIYDDLELN
EEECCCCCCCCEEEECCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA