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The map label for this gene is 78779793

Identifier: 78779793

GI number: 78779793

Start: 1325728

End: 1326837

Strand: Direct

Name: 78779793

Synonym: PMT9312_1409

Alternate gene names: NA

Gene position: 1325728-1326837 (Clockwise)

Preceding gene: 78779790

Following gene: 78779794

Centisome position: 77.56

GC content: 35.05

Gene sequence:

>1110_bases
ATGACAGATATCTTAGTATTAATTTTATTTGTATTGTCTGGCGCTGCTTCAGGATGGCTTGGGGTTGATTTATTGCCCGT
AGACATACTCAAACAGGTATCTAATGTAGAGGGTTTTAGAATTGTTTTAGCGATAATAGGTCTTTTTATAGGATTAGCAG
CTGGTTTTGTATTCCTTCAACTTAGAAAAACGTTTCTTGATCAAATAAGAACAATGCCTACGGACTTATTAATAAGTAGG
TCAGTTGGATTAATTTTAGGATTACTTGTTGCGAATCTCTTACTTGCTCCAATACTATTAATTCCCTTCCCAAGAGAAGT
TTTTTTTGCAAAACCCTTAGCAGCTATATTAAGCAACATTTTCTTTGGTGTGCTTGGTTATAAGTTAGCCGATACCCATG
GAAGGACATTATTGAGAATATTCAATCCAAATAATACTGATGCATATCTAGTGAATGAAGGAATACTTCCTGCTGCAAGT
CCAAAAATTCTAGATACCAGTGTAATTATCGATGGCAGAATCAATGGCCTATTAAGTTGCGGCTTATTGGAAGGTCAAAT
AATTGTTGCTCAAAGTGTAATTGATGAATTACAAACTCTAGCTGATTCAAGCAGTAACGAAAAAAGGTCAAAAGGCAGAA
GAGGTCTTAAATTATTGAAAGAATTAAGGGATTTATATGGGAGAAGACTCGTAATAAACCCAACAAAGTATGAAGGTAAT
GGGGTAGATGAAAAACTCTTGAAAATTACTGAGGATATGACAGGGACTTTAATTACGGCTGATTATAACCTCTCTCAGAT
TGCTGAAGTTAAAGAATTAAAAGTTATGAATTTGAGTGATTTGGTTATTGCTTTAAGGCCAGAAGTACAGCCAGGAGAAT
CACTAAATATAAAAATCGTGAGAGAAGGCAAAGAAAAAATGCAAGGTATTGGATATTTAGATGACGGAACAATGGTTGTT
ATTGATGAGGCTAAGAATTTTGTGGGAAGCAGATTAGACATTGTCATCACAGGAGCATTACAAACTCCCACTGGAAGAAT
GGTCTTTGGAAAACTAATAAATAATCCTGAGTCAAACAAATCTTTTAAATCACCAGCGACACAGGGCTAA

Upstream 100 bases:

>100_bases
ATAATCTAAATACATTTTTAAGCTCCAAAAAAAAGTATTAAGGATCGAAAAAAATAAAATCCTTATTTACTCAATTAATA
AATCCTAGTAGATTATAGAT

Downstream 100 bases:

>100_bases
ATATAGCTAGAATCAAATCAATCTTAATTTTGTGATACAAATGACTGTATCTGCTCCTTATTACGGTGAAAACACTGTTA
TGAGGACCCCGCCCCCTGAT

Product: PIN domain superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MTDILVLILFVLSGAASGWLGVDLLPVDILKQVSNVEGFRIVLAIIGLFIGLAAGFVFLQLRKTFLDQIRTMPTDLLISR
SVGLILGLLVANLLLAPILLIPFPREVFFAKPLAAILSNIFFGVLGYKLADTHGRTLLRIFNPNNTDAYLVNEGILPAAS
PKILDTSVIIDGRINGLLSCGLLEGQIIVAQSVIDELQTLADSSSNEKRSKGRRGLKLLKELRDLYGRRLVINPTKYEGN
GVDEKLLKITEDMTGTLITADYNLSQIAEVKELKVMNLSDLVIALRPEVQPGESLNIKIVREGKEKMQGIGYLDDGTMVV
IDEAKNFVGSRLDIVITGALQTPTGRMVFGKLINNPESNKSFKSPATQG

Sequences:

>Translated_369_residues
MTDILVLILFVLSGAASGWLGVDLLPVDILKQVSNVEGFRIVLAIIGLFIGLAAGFVFLQLRKTFLDQIRTMPTDLLISR
SVGLILGLLVANLLLAPILLIPFPREVFFAKPLAAILSNIFFGVLGYKLADTHGRTLLRIFNPNNTDAYLVNEGILPAAS
PKILDTSVIIDGRINGLLSCGLLEGQIIVAQSVIDELQTLADSSSNEKRSKGRRGLKLLKELRDLYGRRLVINPTKYEGN
GVDEKLLKITEDMTGTLITADYNLSQIAEVKELKVMNLSDLVIALRPEVQPGESLNIKIVREGKEKMQGIGYLDDGTMVV
IDEAKNFVGSRLDIVITGALQTPTGRMVFGKLINNPESNKSFKSPATQG
>Mature_368_residues
TDILVLILFVLSGAASGWLGVDLLPVDILKQVSNVEGFRIVLAIIGLFIGLAAGFVFLQLRKTFLDQIRTMPTDLLISRS
VGLILGLLVANLLLAPILLIPFPREVFFAKPLAAILSNIFFGVLGYKLADTHGRTLLRIFNPNNTDAYLVNEGILPAASP
KILDTSVIIDGRINGLLSCGLLEGQIIVAQSVIDELQTLADSSSNEKRSKGRRGLKLLKELRDLYGRRLVINPTKYEGNG
VDEKLLKITEDMTGTLITADYNLSQIAEVKELKVMNLSDLVIALRPEVQPGESLNIKIVREGKEKMQGIGYLDDGTMVVI
DEAKNFVGSRLDIVITGALQTPTGRMVFGKLINNPESNKSFKSPATQG

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 40208; Mature: 40077

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDILVLILFVLSGAASGWLGVDLLPVDILKQVSNVEGFRIVLAIIGLFIGLAAGFVFLQ
CHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LRKTFLDQIRTMPTDLLISRSVGLILGLLVANLLLAPILLIPFPREVFFAKPLAAILSNI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHH
FFGVLGYKLADTHGRTLLRIFNPNNTDAYLVNEGILPAASPKILDTSVIIDGRINGLLSC
HHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEC
GLLEGQIIVAQSVIDELQTLADSSSNEKRSKGRRGLKLLKELRDLYGRRLVINPTKYEGN
CEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC
GVDEKLLKITEDMTGTLITADYNLSQIAEVKELKVMNLSDLVIALRPEVQPGESLNIKIV
CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCEEEEEE
REGKEKMQGIGYLDDGTMVVIDEAKNFVGSRLDIVITGALQTPTGRMVFGKLINNPESNK
ECCHHHHCCCCEECCCCEEEEECHHHHCCCCEEEEEEECEECCCCHHHHHHHHCCCCCCC
SFKSPATQG
CCCCCCCCC
>Mature Secondary Structure 
TDILVLILFVLSGAASGWLGVDLLPVDILKQVSNVEGFRIVLAIIGLFIGLAAGFVFLQ
HHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LRKTFLDQIRTMPTDLLISRSVGLILGLLVANLLLAPILLIPFPREVFFAKPLAAILSNI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHH
FFGVLGYKLADTHGRTLLRIFNPNNTDAYLVNEGILPAASPKILDTSVIIDGRINGLLSC
HHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEC
GLLEGQIIVAQSVIDELQTLADSSSNEKRSKGRRGLKLLKELRDLYGRRLVINPTKYEGN
CEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC
GVDEKLLKITEDMTGTLITADYNLSQIAEVKELKVMNLSDLVIALRPEVQPGESLNIKIV
CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCEEEEEE
REGKEKMQGIGYLDDGTMVVIDEAKNFVGSRLDIVITGALQTPTGRMVFGKLINNPESNK
ECCHHHHCCCCEECCCCEEEEECHHHHCCCCEEEEEEECEECCCCHHHHHHHHCCCCCCC
SFKSPATQG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]