Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

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The map label for this gene is 78779709

Identifier: 78779709

GI number: 78779709

Start: 1240067

End: 1240987

Strand: Direct

Name: 78779709

Synonym: PMT9312_1326

Alternate gene names: NA

Gene position: 1240067-1240987 (Clockwise)

Preceding gene: 78779708

Following gene: 78779710

Centisome position: 72.55

GC content: 25.08

Gene sequence:

>921_bases
ATGGATTACAAAAATTACTTCCTAAATTGTAGAGAATCATATAAAAACAAAAAACCTTATCTTTCTTCATTTTATGAAAA
TCCAGTAAGGGTAATTCCTCATAATTTCTTTACTAAGGAAACGAAAGATTACTTATTAGATTTGTCTAAAAATATCAAAA
GAGAGTTTGATACAGGTAAACATAAATTAGGTAATATTAGTGGCATTAAAAACTTTTGGCCTTATGCATTACCTATAAAT
AAAACTTGTGAACAATTAATCCCATATTTAGAAGAGACATTTTATGGTTGTAATCTATTTGTAGATAAAGTTTATATTTA
CAGAACCCAAAAAATTGAAATAAAAAAAGATTCTTATCTTTGGCATCATGATAATAATCCAAATGAAATAATTAAAATAA
TAATTTATTTAAATGAGGTAAATCAATTTAATTCCCCATTTGAGTATTTAGCAGATGAAAATAATCGAGGAATGTTAGCA
AAATGTACGAGACTAGGTCCAAATAATTGGGAGCCTGCTCCAAATGATGGAAGACTTGAAGATGAAGTAAAAAATTTAAT
AAAATATAAAAATTGTTCGGGTAAAAAGTTAATTGGTAAGCAATTTACTGCTTGCGCCTTTTCAAATAACTCTATTCATA
GAGTTAACCCTATTATCAAAGGATACAGAGATGTTTTGAACATAAGAGTAAAACCTACAATTTCAAAACCTAGTATTTAC
TTAAGTAAAAAATGGACATCGAGTTTCGGAGTATCTGGAGCTGTAGATCCAGATCCTGAAAAAGATTGGCAATACTATAA
TAAAAAATCAAACTTAAGATTATTAAAGGAAATATATTTAAATATTCTTCTAAAAAAATTAAAAAACAAAATTAAGATTA
TTAAAGGAAATATATTTAAATATTTTTTTAAAAATATTTAA

Upstream 100 bases:

>100_bases
ACATAAAAAGTTACGTAAATATTTTTCAACAGTTAGAGTACAAAATATTTACAAAGCTTATTCAGCTGGATACCGAGCTA
TTTATATTTGTTATAAGTAA

Downstream 100 bases:

>100_bases
AGAATAAGATTTTAAATTCTTAATTTACAAAAATCTATTTTAATATTGCAAAAGGTTTAATATTCATAAAATGCCTAAAG
TAGCTCTATGTATTTCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MDYKNYFLNCRESYKNKKPYLSSFYENPVRVIPHNFFTKETKDYLLDLSKNIKREFDTGKHKLGNISGIKNFWPYALPIN
KTCEQLIPYLEETFYGCNLFVDKVYIYRTQKIEIKKDSYLWHHDNNPNEIIKIIIYLNEVNQFNSPFEYLADENNRGMLA
KCTRLGPNNWEPAPNDGRLEDEVKNLIKYKNCSGKKLIGKQFTACAFSNNSIHRVNPIIKGYRDVLNIRVKPTISKPSIY
LSKKWTSSFGVSGAVDPDPEKDWQYYNKKSNLRLLKEIYLNILLKKLKNKIKIIKGNIFKYFFKNI

Sequences:

>Translated_306_residues
MDYKNYFLNCRESYKNKKPYLSSFYENPVRVIPHNFFTKETKDYLLDLSKNIKREFDTGKHKLGNISGIKNFWPYALPIN
KTCEQLIPYLEETFYGCNLFVDKVYIYRTQKIEIKKDSYLWHHDNNPNEIIKIIIYLNEVNQFNSPFEYLADENNRGMLA
KCTRLGPNNWEPAPNDGRLEDEVKNLIKYKNCSGKKLIGKQFTACAFSNNSIHRVNPIIKGYRDVLNIRVKPTISKPSIY
LSKKWTSSFGVSGAVDPDPEKDWQYYNKKSNLRLLKEIYLNILLKKLKNKIKIIKGNIFKYFFKNI
>Mature_306_residues
MDYKNYFLNCRESYKNKKPYLSSFYENPVRVIPHNFFTKETKDYLLDLSKNIKREFDTGKHKLGNISGIKNFWPYALPIN
KTCEQLIPYLEETFYGCNLFVDKVYIYRTQKIEIKKDSYLWHHDNNPNEIIKIIIYLNEVNQFNSPFEYLADENNRGMLA
KCTRLGPNNWEPAPNDGRLEDEVKNLIKYKNCSGKKLIGKQFTACAFSNNSIHRVNPIIKGYRDVLNIRVKPTISKPSIY
LSKKWTSSFGVSGAVDPDPEKDWQYYNKKSNLRLLKEIYLNILLKKLKNKIKIIKGNIFKYFFKNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36195; Mature: 36195

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYKNYFLNCRESYKNKKPYLSSFYENPVRVIPHNFFTKETKDYLLDLSKNIKREFDTGK
CCCHHHHHHHHHHCCCCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCH
HKLGNISGIKNFWPYALPINKTCEQLIPYLEETFYGCNLFVDKVYIYRTQKIEIKKDSYL
HHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCEE
WHHDNNPNEIIKIIIYLNEVNQFNSPFEYLADENNRGMLAKCTRLGPNNWEPAPNDGRLE
EECCCCHHHEEEEEEEEEHHHCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCH
DEVKNLIKYKNCSGKKLIGKQFTACAFSNNSIHRVNPIIKGYRDVLNIRVKPTISKPSIY
HHHHHHHHHCCCCCCCHHCCCCEEEEECCCCCEEHHHHHHHHHHHHEEEEECCCCCCCEE
LSKKWTSSFGVSGAVDPDPEKDWQYYNKKSNLRLLKEIYLNILLKKLKNKIKIIKGNIFK
EEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEHHHHHHH
YFFKNI
HHHHCC
>Mature Secondary Structure
MDYKNYFLNCRESYKNKKPYLSSFYENPVRVIPHNFFTKETKDYLLDLSKNIKREFDTGK
CCCHHHHHHHHHHCCCCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCH
HKLGNISGIKNFWPYALPINKTCEQLIPYLEETFYGCNLFVDKVYIYRTQKIEIKKDSYL
HHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCEE
WHHDNNPNEIIKIIIYLNEVNQFNSPFEYLADENNRGMLAKCTRLGPNNWEPAPNDGRLE
EECCCCHHHEEEEEEEEEHHHCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCH
DEVKNLIKYKNCSGKKLIGKQFTACAFSNNSIHRVNPIIKGYRDVLNIRVKPTISKPSIY
HHHHHHHHHCCCCCCCHHCCCCEEEEECCCCCEEHHHHHHHHHHHHEEEEECCCCCCCEE
LSKKWTSSFGVSGAVDPDPEKDWQYYNKKSNLRLLKEIYLNILLKKLKNKIKIIKGNIFK
EEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEHHHHHHH
YFFKNI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA