| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779684
Identifier: 78779684
GI number: 78779684
Start: 1208196
End: 1209452
Strand: Direct
Name: 78779684
Synonym: PMT9312_1301
Alternate gene names: NA
Gene position: 1208196-1209452 (Clockwise)
Preceding gene: 78779683
Following gene: 78779685
Centisome position: 70.69
GC content: 27.21
Gene sequence:
>1257_bases ATGAAAATTTGGATTTTGCAGACTGGAGAATTCCTACAAACAGATGGTGAAAATGTTAGGCCAATGAGGGCTATTAATCT TTCTGAATATTTTCTTAAAAGAGGACATTCAGTAAAACTTTTAAGCTCTGACTTTAGCCACCAAATGAAATTACATAGAT ATAAAAATTTAACAGTGAAAAAATTAAGCGATAATTTTCAAATAACTCTTATCCCCTCCCCTGGCTATAAATCAAATATA AGTTTTCAAAGACTTTTAGATCATTTTATTCTTGGCATAAATACGTTTAAATATCTTTTTAAAATTAGACCTGAAAACTA TCCTGACTTTGTTTTTATAGGTTACCCTCCCATTGAAACAACTTTCTTTTTATCAATTTGGTTGAAATCAAAAAAAATAC CATTTTGCGTTGATATAAAAGATCAATGGCCTCATATATTTCTTCAAAAATCAATGGGATTAAAAAGACAAATTATCAAA TTAATATTGACTCCATATTTTTATGCCGCAAAATTTTCTTTAAAAAACGCAAATTTCATAACTGCAATAACTCCCAATTT TTTAAATTGGTCTGAAAATTTTTCTAAAAATTTCAATAAAAACAATCGGGTCTTGTATTTAGTTCCCAACATAAAGGAAA TTTCACAATTAAAATTAGAAGAAAGTTTACTTTGGTGGAAAAAGCAAATTGGGATAGATATAAAAAAGAAAAATAAAATA ATTTTTGCTGGTAATATCAACAACGCCTATGATTTCAATGATCTTATTTCAGCAACGTTATCCCCTAAATTAGAGGATTG TGAATTTGAAATATTAATATGCGGAGATGGAGAATGCATTAGCTTTTTAAAAGAAAAGTTAAAAGAAAAAAGTAATATTT TCTTTCCTGGATGGGTTGACTTAAATCAATTGACAGCAATAAAAAAACTATCAATTGCTACTTTAGCTCCATATAGAAAC ACACCCGACTTTCAAATGAGTATCCCAAATAAGGTGATTGATAGCTTATCTTTTGGGCTTCCTATTATTACTTCACTAAA AGGCGAATTAGAAAATATAATCAAAAAATATAATGTTGGATATTTTTGCGATAAAAATTCTAAATGGGAAGATCAAATCT TCTCATGTATAAATGATCCTATTAAAAGAGATTCATTATCTTATAATTCTAGAAAACTTTATGAAGAAAAATTCACTTCT GATAATGTGTATGGAGAATTTATTAAATTTATCGAACAAAACTACAAGTCTTTATAA
Upstream 100 bases:
>100_bases ATGTGATGGAGAAAGCGGCTTATCAAGCATAAAAATAATTAATGCAGCTTACAAATCTGCCAAAGAACAGAGATTTATAA AATTATCATCTATCTAATTT
Downstream 100 bases:
>100_bases GAGCAAAGAATAATAAAAGCAAGGCAATTATTATGAATAGTGCAGATTTTTAGTTTATGATTAAATAAATTTGGATGCGT TTATAAATATATGAAAGATT
Product: glycosyltransferase-like protein
Products: NA
Alternate protein names: Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family Protein
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKIWILQTGEFLQTDGENVRPMRAINLSEYFLKRGHSVKLLSSDFSHQMKLHRYKNLTVKKLSDNFQITLIPSPGYKSNI SFQRLLDHFILGINTFKYLFKIRPENYPDFVFIGYPPIETTFFLSIWLKSKKIPFCVDIKDQWPHIFLQKSMGLKRQIIK LILTPYFYAAKFSLKNANFITAITPNFLNWSENFSKNFNKNNRVLYLVPNIKEISQLKLEESLLWWKKQIGIDIKKKNKI IFAGNINNAYDFNDLISATLSPKLEDCEFEILICGDGECISFLKEKLKEKSNIFFPGWVDLNQLTAIKKLSIATLAPYRN TPDFQMSIPNKVIDSLSFGLPIITSLKGELENIIKKYNVGYFCDKNSKWEDQIFSCINDPIKRDSLSYNSRKLYEEKFTS DNVYGEFIKFIEQNYKSL
Sequences:
>Translated_418_residues MKIWILQTGEFLQTDGENVRPMRAINLSEYFLKRGHSVKLLSSDFSHQMKLHRYKNLTVKKLSDNFQITLIPSPGYKSNI SFQRLLDHFILGINTFKYLFKIRPENYPDFVFIGYPPIETTFFLSIWLKSKKIPFCVDIKDQWPHIFLQKSMGLKRQIIK LILTPYFYAAKFSLKNANFITAITPNFLNWSENFSKNFNKNNRVLYLVPNIKEISQLKLEESLLWWKKQIGIDIKKKNKI IFAGNINNAYDFNDLISATLSPKLEDCEFEILICGDGECISFLKEKLKEKSNIFFPGWVDLNQLTAIKKLSIATLAPYRN TPDFQMSIPNKVIDSLSFGLPIITSLKGELENIIKKYNVGYFCDKNSKWEDQIFSCINDPIKRDSLSYNSRKLYEEKFTS DNVYGEFIKFIEQNYKSL >Mature_418_residues MKIWILQTGEFLQTDGENVRPMRAINLSEYFLKRGHSVKLLSSDFSHQMKLHRYKNLTVKKLSDNFQITLIPSPGYKSNI SFQRLLDHFILGINTFKYLFKIRPENYPDFVFIGYPPIETTFFLSIWLKSKKIPFCVDIKDQWPHIFLQKSMGLKRQIIK LILTPYFYAAKFSLKNANFITAITPNFLNWSENFSKNFNKNNRVLYLVPNIKEISQLKLEESLLWWKKQIGIDIKKKNKI IFAGNINNAYDFNDLISATLSPKLEDCEFEILICGDGECISFLKEKLKEKSNIFFPGWVDLNQLTAIKKLSIATLAPYRN TPDFQMSIPNKVIDSLSFGLPIITSLKGELENIIKKYNVGYFCDKNSKWEDQIFSCINDPIKRDSLSYNSRKLYEEKFTS DNVYGEFIKFIEQNYKSL
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48962; Mature: 48962
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIWILQTGEFLQTDGENVRPMRAINLSEYFLKRGHSVKLLSSDFSHQMKLHRYKNLTVK CEEEEEECCCHHHCCCCCCCCEEEECHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCEEE KLSDNFQITLIPSPGYKSNISFQRLLDHFILGINTFKYLFKIRPENYPDFVFIGYPPIET EECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEECCCCCC TFFLSIWLKSKKIPFCVDIKDQWPHIFLQKSMGLKRQIIKLILTPYFYAAKFSLKNANFI EEEEEEEEECCCCCEEEECCCCCCEEEEHHHCCHHHHHHHHHHHHHHEEEEEEECCCCEE TAITPNFLNWSENFSKNFNKNNRVLYLVPNIKEISQLKLEESLLWWKKQIGIDIKKKNKI EEECCCCCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEE IFAGNINNAYDFNDLISATLSPKLEDCEFEILICGDGECISFLKEKLKEKSNIFFPGWVD EEEECCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCEECCCCCC LNQLTAIKKLSIATLAPYRNTPDFQMSIPNKVIDSLSFGLPIITSLKGELENIIKKYNVG HHHHHHHHHHHHEEECCCCCCCCCEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC YFCDKNSKWEDQIFSCINDPIKRDSLSYNSRKLYEEKFTSDNVYGEFIKFIEQNYKSL EEECCCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIWILQTGEFLQTDGENVRPMRAINLSEYFLKRGHSVKLLSSDFSHQMKLHRYKNLTVK CEEEEEECCCHHHCCCCCCCCEEEECHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCEEE KLSDNFQITLIPSPGYKSNISFQRLLDHFILGINTFKYLFKIRPENYPDFVFIGYPPIET EECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEECCCCCC TFFLSIWLKSKKIPFCVDIKDQWPHIFLQKSMGLKRQIIKLILTPYFYAAKFSLKNANFI EEEEEEEEECCCCCEEEECCCCCCEEEEHHHCCHHHHHHHHHHHHHHEEEEEEECCCCEE TAITPNFLNWSENFSKNFNKNNRVLYLVPNIKEISQLKLEESLLWWKKQIGIDIKKKNKI EEECCCCCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEE IFAGNINNAYDFNDLISATLSPKLEDCEFEILICGDGECISFLKEKLKEKSNIFFPGWVD EEEECCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCEECCCCCC LNQLTAIKKLSIATLAPYRNTPDFQMSIPNKVIDSLSFGLPIITSLKGELENIIKKYNVG HHHHHHHHHHHHEEECCCCCCCCCEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC YFCDKNSKWEDQIFSCINDPIKRDSLSYNSRKLYEEKFTSDNVYGEFIKFIEQNYKSL EEECCCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA