Click here to switch to the map view.

The map label for this gene is 78779574

Identifier: 78779574

GI number: 78779574

Start: 1110930

End: 1112528

Strand: Direct

Name: 78779574

Synonym: PMT9312_1191

Alternate gene names: NA

Gene position: 1110930-1112528 (Clockwise)

Preceding gene: 78779573

Following gene: 78779575

Centisome position: 65.0

GC content: 22.95

Gene sequence:

>1599_bases
ATGATAGATAAAAAGAAAAAGAAAAAGAAAAATATTAAATTTCTTAATTTCTTAAAGGATCTAAGTTATAAATATAAAAA
GGAGATAAATAATATACTTGATATTACAATTGTTGAGGATGATCAATTAAAGCTTTTAAAAGTTAAATTACACAAGGGAC
ATAAAAACTTAAAATGTTTTCTCAACAAAACGGTTATTAGCTCTAGTCAGTTTAAAGAATTATATAGATATTTATCCTTT
GCCGATAAAGAAAAAATTACTTCAAAATTTAATTCATATTTCTCCAAAAACAAAGAAAAATATATTAATTTAAAAAAATC
AAACTTTAGTAAATTGAAATTCAACAATTTTAATTTAAAAAGATTAACACCTCCAACTAATTTTAGGAGTATTCAAAGTT
TAAAAAAAATTAATCAATTAATAACTTTTTCAAAATTTAAATCATTCTTAGATGAAAAAGCTCACAAATCTTATTTAGGA
AAGTTATTTACAAATTTTGAAATAGTAAAAATAATAGAGAAAATAAAATACAAAAAATATTTTAGTGGGAGTTTAAATAA
AAAATTCACAGTTATTGGTGACTATAAAAAGATTCAATTCGGTAATAAAAAATTTCTAGAGACCTTTCAAGAAAAAATTA
GCAATTATAAATTTTTTTCAAATTTATTTGATAGTCAATCGACAATATCAATTAATAAACCTGAATACATAGCTGCATTA
TATTATAGCGATCATTTTTTATTTATCACCAAGTTATGGAAGTCCTCAGAAAATATATTAAATGTTGAAAAAGTAATAGA
ATTGCCTGTTCCTGCAAGTGTAATTGGAGATGATGTAGTAAATAACGTAGATGAATTGATTGAACTTTCTCTAGATTCTT
TTGAAGTATTAGATCTTAAAAATCCGCCAATATTAATTGTGCTTTCTTCATCTTTTTTTACTATTAAATCTTTTAAGAGT
GATAAATCAAATGAAGTTAGCGAAAATGATGAAATTATTCAGAGCAAGAGTCCATATTTACCTCAAGACACATTAATAGA
TATACAAAAAATTAATGATTCTATTTATAATGCTATTTTTACTCGTAAATCATTAATTAATGGTTGGATCAAAGCTCTAA
GGAAAATCAATTATCCTGTTGTAGGGATTACGACCCCAGGTCCTCATCAGATAGATTTTCTAAGAGAAAACAAAAAAATA
ATAAATGAACTAGAAATAATTATAGATATTGAATTTAATTCAACTACAATATTTATCAGTAATAGAGATTATGAATTAAG
TTCACAGAAAATTCCATATGGTTCAACACTTTATAGAAAAAAAGAATTAGTTGAGAGCTACTTTTCTAGGTTGATAAAAT
CTATAAAATTATTAACTGATGATATTAAAATGGATTTCCCAGAAACAATTTATGTTAGTGGTTTTGGATTAGATGACTTT
GATTATAAATCACAAAAATTACCTTATCCATTTGTAAGATTTTCAGAATTAAATAAAACTAATTTCAAATTTAATAAAAA
AGATTCAGAAGATTTAGTTACTACAGAGATTAATTCAAAATTAAATACTATTCTAGGAATTACAAGTAAATGCCTCTAA

Upstream 100 bases:

>100_bases
ATATTAATAAAAATCTAAAAATCAAAAAAATATCGCTAGAAAATGAAACTGTTATTTTTACAGATGGCGAGAATGAATTT
AAATTGGAATTTTCAGAAAA

Downstream 100 bases:

>100_bases
AGTATAATTTTGCCCTTAAGAATAACGAGCTTCAAAGGTGGGAGCCCAGAGGGAATATAGAGCGCAAAAAAACAACTTCA
TTTAAAGAAAAAATTGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MIDKKKKKKKNIKFLNFLKDLSYKYKKEINNILDITIVEDDQLKLLKVKLHKGHKNLKCFLNKTVISSSQFKELYRYLSF
ADKEKITSKFNSYFSKNKEKYINLKKSNFSKLKFNNFNLKRLTPPTNFRSIQSLKKINQLITFSKFKSFLDEKAHKSYLG
KLFTNFEIVKIIEKIKYKKYFSGSLNKKFTVIGDYKKIQFGNKKFLETFQEKISNYKFFSNLFDSQSTISINKPEYIAAL
YYSDHFLFITKLWKSSENILNVEKVIELPVPASVIGDDVVNNVDELIELSLDSFEVLDLKNPPILIVLSSSFFTIKSFKS
DKSNEVSENDEIIQSKSPYLPQDTLIDIQKINDSIYNAIFTRKSLINGWIKALRKINYPVVGITTPGPHQIDFLRENKKI
INELEIIIDIEFNSTTIFISNRDYELSSQKIPYGSTLYRKKELVESYFSRLIKSIKLLTDDIKMDFPETIYVSGFGLDDF
DYKSQKLPYPFVRFSELNKTNFKFNKKDSEDLVTTEINSKLNTILGITSKCL

Sequences:

>Translated_532_residues
MIDKKKKKKKNIKFLNFLKDLSYKYKKEINNILDITIVEDDQLKLLKVKLHKGHKNLKCFLNKTVISSSQFKELYRYLSF
ADKEKITSKFNSYFSKNKEKYINLKKSNFSKLKFNNFNLKRLTPPTNFRSIQSLKKINQLITFSKFKSFLDEKAHKSYLG
KLFTNFEIVKIIEKIKYKKYFSGSLNKKFTVIGDYKKIQFGNKKFLETFQEKISNYKFFSNLFDSQSTISINKPEYIAAL
YYSDHFLFITKLWKSSENILNVEKVIELPVPASVIGDDVVNNVDELIELSLDSFEVLDLKNPPILIVLSSSFFTIKSFKS
DKSNEVSENDEIIQSKSPYLPQDTLIDIQKINDSIYNAIFTRKSLINGWIKALRKINYPVVGITTPGPHQIDFLRENKKI
INELEIIIDIEFNSTTIFISNRDYELSSQKIPYGSTLYRKKELVESYFSRLIKSIKLLTDDIKMDFPETIYVSGFGLDDF
DYKSQKLPYPFVRFSELNKTNFKFNKKDSEDLVTTEINSKLNTILGITSKCL
>Mature_532_residues
MIDKKKKKKKNIKFLNFLKDLSYKYKKEINNILDITIVEDDQLKLLKVKLHKGHKNLKCFLNKTVISSSQFKELYRYLSF
ADKEKITSKFNSYFSKNKEKYINLKKSNFSKLKFNNFNLKRLTPPTNFRSIQSLKKINQLITFSKFKSFLDEKAHKSYLG
KLFTNFEIVKIIEKIKYKKYFSGSLNKKFTVIGDYKKIQFGNKKFLETFQEKISNYKFFSNLFDSQSTISINKPEYIAAL
YYSDHFLFITKLWKSSENILNVEKVIELPVPASVIGDDVVNNVDELIELSLDSFEVLDLKNPPILIVLSSSFFTIKSFKS
DKSNEVSENDEIIQSKSPYLPQDTLIDIQKINDSIYNAIFTRKSLINGWIKALRKINYPVVGITTPGPHQIDFLRENKKI
INELEIIIDIEFNSTTIFISNRDYELSSQKIPYGSTLYRKKELVESYFSRLIKSIKLLTDDIKMDFPETIYVSGFGLDDF
DYKSQKLPYPFVRFSELNKTNFKFNKKDSEDLVTTEINSKLNTILGITSKCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62279; Mature: 62279

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDKKKKKKKNIKFLNFLKDLSYKYKKEINNILDITIVEDDQLKLLKVKLHKGHKNLKCF
CCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCCEEHE
LNKTVISSSQFKELYRYLSFADKEKITSKFNSYFSKNKEKYINLKKSNFSKLKFNNFNLK
EHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCEEEECCCCEE
RLTPPTNFRSIQSLKKINQLITFSKFKSFLDEKAHKSYLGKLFTNFEIVKIIEKIKYKKY
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FSGSLNKKFTVIGDYKKIQFGNKKFLETFQEKISNYKFFSNLFDSQSTISINKPEYIAAL
HCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHCHHHHHHHCCCCCEEEECCCCEEEEE
YYSDHFLFITKLWKSSENILNVEKVIELPVPASVIGDDVVNNVDELIELSLDSFEVLDLK
EECCCEEEEEHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC
NPPILIVLSSSFFTIKSFKSDKSNEVSENDEIIQSKSPYLPQDTLIDIQKINDSIYNAIF
CCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
TRKSLINGWIKALRKINYPVVGITTPGPHQIDFLRENKKIINELEIIIDIEFNSTTIFIS
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCEEEEEEEEEECCEEEEEE
NRDYELSSQKIPYGSTLYRKKELVESYFSRLIKSIKLLTDDIKMDFPETIYVSGFGLDDF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
DYKSQKLPYPFVRFSELNKTNFKFNKKDSEDLVTTEINSKLNTILGITSKCL
CCCCCCCCCCCHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDKKKKKKKNIKFLNFLKDLSYKYKKEINNILDITIVEDDQLKLLKVKLHKGHKNLKCF
CCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCCEEHE
LNKTVISSSQFKELYRYLSFADKEKITSKFNSYFSKNKEKYINLKKSNFSKLKFNNFNLK
EHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCEEEECCCCEE
RLTPPTNFRSIQSLKKINQLITFSKFKSFLDEKAHKSYLGKLFTNFEIVKIIEKIKYKKY
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FSGSLNKKFTVIGDYKKIQFGNKKFLETFQEKISNYKFFSNLFDSQSTISINKPEYIAAL
HCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHCHHHHHHHCCCCCEEEECCCCEEEEE
YYSDHFLFITKLWKSSENILNVEKVIELPVPASVIGDDVVNNVDELIELSLDSFEVLDLK
EECCCEEEEEHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC
NPPILIVLSSSFFTIKSFKSDKSNEVSENDEIIQSKSPYLPQDTLIDIQKINDSIYNAIF
CCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
TRKSLINGWIKALRKINYPVVGITTPGPHQIDFLRENKKIINELEIIIDIEFNSTTIFIS
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCEEEEEEEEEECCEEEEEE
NRDYELSSQKIPYGSTLYRKKELVESYFSRLIKSIKLLTDDIKMDFPETIYVSGFGLDDF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
DYKSQKLPYPFVRFSELNKTNFKFNKKDSEDLVTTEINSKLNTILGITSKCL
CCCCCCCCCCCHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA