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The map label for this gene is 78779543

Identifier: 78779543

GI number: 78779543

Start: 1074708

End: 1074896

Strand: Direct

Name: 78779543

Synonym: PMT9312_1160

Alternate gene names: NA

Gene position: 1074708-1074896 (Clockwise)

Preceding gene: 78779542

Following gene: 78779560

Centisome position: 62.88

GC content: 33.33

Gene sequence:

>189_bases
ATGAACTTAAAAAGATCACCATTCGCAATTCAAGATAAGAACTCAAGAGATCTTGATAATGCAAATGAATATTCAACTCT
CAAGGAATTAATCCAAGAGCAAGAGATTTCAACAGATTTATCAGATTACTGGGATAAGGAATGTGAATTAAATCCATCCA
ACCCACGTTGTCTGGTCTATGAAGATTAA

Upstream 100 bases:

>100_bases
CATATGACTGCCTGATGCTTGCTAGAGAATTTAATTCTTATGTACATGACCATCCAAATTCTGTAACTAGAATCCAACAA
AAATTTTGAGGTAATTAATT

Downstream 100 bases:

>100_bases
TGATCCTTTTTTTGGCACACCCACATTCTTGCTATTAATTAAGTAGAAACTTTTTTATTAATGCCATTAGACGTATTTCT
AATGAATATGTGTGTTGTGG

Product: virion host shutoff protein-like

Products: NA

Alternate protein names: Virion Host Shutoff Protein

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MNLKRSPFAIQDKNSRDLDNANEYSTLKELIQEQEISTDLSDYWDKECELNPSNPRCLVYED

Sequences:

>Translated_62_residues
MNLKRSPFAIQDKNSRDLDNANEYSTLKELIQEQEISTDLSDYWDKECELNPSNPRCLVYED
>Mature_62_residues
MNLKRSPFAIQDKNSRDLDNANEYSTLKELIQEQEISTDLSDYWDKECELNPSNPRCLVYED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7327; Mature: 7327

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKRSPFAIQDKNSRDLDNANEYSTLKELIQEQEISTDLSDYWDKECELNPSNPRCLVY
CCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEEE
ED
CC
>Mature Secondary Structure
MNLKRSPFAIQDKNSRDLDNANEYSTLKELIQEQEISTDLSDYWDKECELNPSNPRCLVY
CCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEEE
ED
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA