| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
Click here to switch to the map view.
The map label for this gene is 78779541
Identifier: 78779541
GI number: 78779541
Start: 1073910
End: 1074203
Strand: Direct
Name: 78779541
Synonym: PMT9312_1158
Alternate gene names: NA
Gene position: 1073910-1074203 (Clockwise)
Preceding gene: 78779535
Following gene: 78779542
Centisome position: 62.83
GC content: 30.95
Gene sequence:
>294_bases ATGAAAGTTCTCGAAAATATTGCATCCGATTTAGAACAAAGAATTACTGAAGCTTCAATTGGGAATTCTTCTAGACCAAC TATTTTATTTTGTGGCTGCGATCCTCGACTGAAAAAGGATTTGCATAAACGTGCTAAGCGTATTGGCTTTACTCCCTCTT ACTCAATAAAACATCCATCTATTAAAGTTGAATTGCAGAATTTTGGTAATAGAAAAATAGAAACAGATAGATTTAAAACA ATAACTATGGACTACGAAAACTTTGAATTTATTTGTAGATATTTAGAGAGTTAA
Upstream 100 bases:
>100_bases CCTTTAGTATTTTTAGGATTTTTTGCGGTTTATAAGAGATCAAAAAGAAAGAAAAGACAGTTTCATGCACCGCCTACACA TCAACTACCTAGTTAATTGA
Downstream 100 bases:
>100_bases GCAGATTGAAAAACAAAGGTTTTAATGTAACTCAGGGCATGGCTTTACTACTATTGAAGCCTTTAAGTCTACCTGCAAAT CTAGTCCTTAAATTAATTAT
Product: vanadium/alternative nitrogenase delta-like
Products: NA
Alternate protein names: VaNADium/Alternative Nitrogenase Delta-Like
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MKVLENIASDLEQRITEASIGNSSRPTILFCGCDPRLKKDLHKRAKRIGFTPSYSIKHPSIKVELQNFGNRKIETDRFKT ITMDYENFEFICRYLES
Sequences:
>Translated_97_residues MKVLENIASDLEQRITEASIGNSSRPTILFCGCDPRLKKDLHKRAKRIGFTPSYSIKHPSIKVELQNFGNRKIETDRFKT ITMDYENFEFICRYLES >Mature_97_residues MKVLENIASDLEQRITEASIGNSSRPTILFCGCDPRLKKDLHKRAKRIGFTPSYSIKHPSIKVELQNFGNRKIETDRFKT ITMDYENFEFICRYLES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11330; Mature: 11330
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLENIASDLEQRITEASIGNSSRPTILFCGCDPRLKKDLHKRAKRIGFTPSYSIKHPS CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCE IKVELQNFGNRKIETDRFKTITMDYENFEFICRYLES EEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHCC >Mature Secondary Structure MKVLENIASDLEQRITEASIGNSSRPTILFCGCDPRLKKDLHKRAKRIGFTPSYSIKHPS CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCE IKVELQNFGNRKIETDRFKTITMDYENFEFICRYLES EEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA