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The map label for this gene is 78779492

Identifier: 78779492

GI number: 78779492

Start: 1021705

End: 1022262

Strand: Direct

Name: 78779492

Synonym: PMT9312_1109

Alternate gene names: NA

Gene position: 1021705-1022262 (Clockwise)

Preceding gene: 78779489

Following gene: 78779502

Centisome position: 59.78

GC content: 32.26

Gene sequence:

>558_bases
ATGAAAAATATTAAATTTAACCCTTTCAAATATTTATTTTTGATTTTTTTGTGTTTAACACTTAGTGCTTGTAGTGGCGG
ACTCAATGCGGGATTAGAAGCTTATCAAAGTCCAGATGGAAGATATGCCTTTTTGTATCCAACAGGATGGACGAGAGTAA
AAGTCGATGGAGGACCTGAAATTATTTATCATGACTTAATAAATAGTAATGAGACCTTAAGTTTAGTTATTTCTGATGTA
AATAAAGAGGTTCAATTAGAGCAATTAGGAAGCCCAAGTGAAGTAGGTCAAACATTAATTGATAAAGTAATTGCTCCCGA
AGGTTCAGGTAGAAATGTAAAACTTATAAATGCCAATCAGAGGGAGGCATCCAATCATATTTTCTATGATTTAGAGTATG
AATTAAATTTAAATGAAAAGGCCAGACACGAATTAGCTACTGTCGTAATTGATAGAGGAACACTTTACACTTTTGCTGTG
GGAACAAATGAAGAGAGATGGAATAAAGTTGACGGCATGTTTAGTAATGTAATTGAGTCATTTAAATTTTTAATATAG

Upstream 100 bases:

>100_bases
TAAACTATTTCTAGGGATAATTTAGACGCAAAATTATGAATTGCCATAATTGTTTGCTTTTAATGTCTTATTATGTTTTT
AATTAGTAATTTCAAACAAA

Downstream 100 bases:

>100_bases
TTTAGAAATTCTATACTAGATTCCTAATTGAACAATCCACAAATCAGCATATATTTTGTTCTGATCTAATAGTTTTTCAT
GTTTTCCACTTTCAACTATT

Product: photosystem II oxygen evolving complex protein PsbP

Products: NA

Alternate protein names: Photosystem II Oxygen-Evolving Complex; Photosystem II PsbP Protein; Photosystem II Oxygen Evolution Complex Protein PsbP

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKNIKFNPFKYLFLIFLCLTLSACSGGLNAGLEAYQSPDGRYAFLYPTGWTRVKVDGGPEIIYHDLINSNETLSLVISDV
NKEVQLEQLGSPSEVGQTLIDKVIAPEGSGRNVKLINANQREASNHIFYDLEYELNLNEKARHELATVVIDRGTLYTFAV
GTNEERWNKVDGMFSNVIESFKFLI

Sequences:

>Translated_185_residues
MKNIKFNPFKYLFLIFLCLTLSACSGGLNAGLEAYQSPDGRYAFLYPTGWTRVKVDGGPEIIYHDLINSNETLSLVISDV
NKEVQLEQLGSPSEVGQTLIDKVIAPEGSGRNVKLINANQREASNHIFYDLEYELNLNEKARHELATVVIDRGTLYTFAV
GTNEERWNKVDGMFSNVIESFKFLI
>Mature_185_residues
MKNIKFNPFKYLFLIFLCLTLSACSGGLNAGLEAYQSPDGRYAFLYPTGWTRVKVDGGPEIIYHDLINSNETLSLVISDV
NKEVQLEQLGSPSEVGQTLIDKVIAPEGSGRNVKLINANQREASNHIFYDLEYELNLNEKARHELATVVIDRGTLYTFAV
GTNEERWNKVDGMFSNVIESFKFLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20816; Mature: 20816

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIKFNPFKYLFLIFLCLTLSACSGGLNAGLEAYQSPDGRYAFLYPTGWTRVKVDGGPE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEECCCCEEEEECCCCC
IIYHDLINSNETLSLVISDVNKEVQLEQLGSPSEVGQTLIDKVIAPEGSGRNVKLINANQ
EEEEECCCCCCEEEEEEECCCCEEEHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCC
REASNHIFYDLEYELNLNEKARHELATVVIDRGTLYTFAVGTNEERWNKVDGMFSNVIES
CCCCCEEEEEEEEEECCCHHHHHHEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHH
FKFLI
HHHCC
>Mature Secondary Structure
MKNIKFNPFKYLFLIFLCLTLSACSGGLNAGLEAYQSPDGRYAFLYPTGWTRVKVDGGPE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEECCCCEEEEECCCCC
IIYHDLINSNETLSLVISDVNKEVQLEQLGSPSEVGQTLIDKVIAPEGSGRNVKLINANQ
EEEEECCCCCCEEEEEEECCCCEEEHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCC
REASNHIFYDLEYELNLNEKARHELATVVIDRGTLYTFAVGTNEERWNKVDGMFSNVIES
CCCCCEEEEEEEEEECCCHHHHHHEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHH
FKFLI
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA