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The map label for this gene is 78779459

Identifier: 78779459

GI number: 78779459

Start: 985502

End: 987085

Strand: Reverse

Name: 78779459

Synonym: PMT9312_1076

Alternate gene names: NA

Gene position: 987085-985502 (Counterclockwise)

Preceding gene: 78779462

Following gene: 78779456

Centisome position: 57.75

GC content: 33.14

Gene sequence:

>1584_bases
ATGAATGGGCAATACCCAAAAAAAAATGTTTTAGGTCAGTTAGCGATAGTTTTACATGCCCATCTTCCTTATGTAAGAAA
AAATGAAAGAAATTCGTTAGAAGAGGACTGGTTATTTCAGGCGATATTGGAATGTTATATACCACTACTTCAATCAATAG
AATCTTCCAAAAATGAAAATCCTTTAAATACAAAACTTACTATTAGTTTGTCTCCAACATTATTATCACTTCTAGATAAT
AAACAAATTCAAGAAACTTTCCCAAGCTGGATTGAAACAAGGAATGATTTCTTAAACGAACTGCCTCAAAAAGAAAAAAA
TGCTTCTGCATTTTTGATAAAAAATCTTAATGACAAATACTTATACTGGCAAAAATGTTCAGGAAATTTAATTGAGAAGT
TTAGAGTTTTAAGTATCTCTGGAAATTTGGATATTCTCACTTGTGCTGCTACACACGGATATTTGCCAATCCTAAGAGAG
AATCCTGAAACTGTTAAAGGACAAATTAATACAGCCATTAGGAGCCATGAAAATATTTTTGGAATTAAGCCTCTCGGTAT
TTGGCTACCTGAATGCGCATATTACGAAAATTTAGATGAAATTCTATTTAATTCTGGAATTAGATATGCAATCTTAGACG
GTCATGGGATTCTTAATTCCACACCAAGGCCTAGGTATGGAGTATACGCTCCAATCTGCTCGAAAAAAGGAGTTGCATTT
TTCGGAAGAGATAGTGAGTCAACCCTGCCCGTTTGGTCTGCTAAGGATGGATTCCCGGGAGACAAAGTTTATAGGGAATT
TCATAAAGATTTAGGTTGGGAATTACCTATCTTTAAGCTTCAAAAGAAAGGAATTTCAACTAAAAGACCCTTGGGTTTAA
AATTTCATAAGATTACAGATGAAAACGTCCCATTAGGGGAAAAGGAGTTTTACTTAGAAAATGAAGCCAAAAAGAAGGCT
TCAGAACATGCTGATGCTTATCTTCTAGAGAGATCCAAACAATTAGAAAAATTAACTTTATCGTCTTCCTTTAAGCCCTT
ATTAGTGGCTCCATTTGATGCAGAGTTATTTGGTCATTGGTGGTATGAGGGACCTTTTTTTATTGAAAATATTTTAAAGA
ACTCGAGTAAATATTCAATTAAGCTTACAAATTTAAAAGAATTCTTACTTCAAAAGCCAAATCTTCAGATTTGTGATCCA
TCGTCATCAAGCTGGGGACAAGGTGGTTACCATAATTACTGGATTAATGATGCAAATGCATGGATCGTTCCAGAAATCAC
AAAAGCAGGTTCAACTTTTGTTGATTTATGCTCGAAAAATTTTAATAATGAATTATCTTTAAGACTTTTCAAACAAGCAG
CAAGAGAATTGCTTCTCTCTGAGTCATCTGATTGGAGTTTTATCCTAAGAGCTGGAACTACAACTAAGCTTGCAAAAGAG
AGGATAGAAAGACACTTGTTTAGGTTCTGGAAATTAGTTGAAATGATTAAAAATCATTCCAACATTAATTTAAAATTTCT
TGAAGATATTGAGGAAGAAGATAAAGTTTTCCCAGATATTAACATTAATGATTGGCGAAAATAA

Upstream 100 bases:

>100_bases
TACTTTAATTATTAAAGTATTGTTTTAAGATTAAAGCTTCCTTTTTATAAAAGGTTAATTTTGATTTTTTATAGAATTAC
AGGCATAACTTATAAAAAGT

Downstream 100 bases:

>100_bases
AATATTAATTTAACTTAAGCATTCCTAGTTTTACTTTTAGAGGTGAATTTATAAACATCTTACTCATGACGTAAATTAGT
TTTGGAAGTGGAAGAGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Alpha-Amylase; (1-_4)-Alpha-D-Glucan Branching; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MNGQYPKKNVLGQLAIVLHAHLPYVRKNERNSLEEDWLFQAILECYIPLLQSIESSKNENPLNTKLTISLSPTLLSLLDN
KQIQETFPSWIETRNDFLNELPQKEKNASAFLIKNLNDKYLYWQKCSGNLIEKFRVLSISGNLDILTCAATHGYLPILRE
NPETVKGQINTAIRSHENIFGIKPLGIWLPECAYYENLDEILFNSGIRYAILDGHGILNSTPRPRYGVYAPICSKKGVAF
FGRDSESTLPVWSAKDGFPGDKVYREFHKDLGWELPIFKLQKKGISTKRPLGLKFHKITDENVPLGEKEFYLENEAKKKA
SEHADAYLLERSKQLEKLTLSSSFKPLLVAPFDAELFGHWWYEGPFFIENILKNSSKYSIKLTNLKEFLLQKPNLQICDP
SSSSWGQGGYHNYWINDANAWIVPEITKAGSTFVDLCSKNFNNELSLRLFKQAARELLLSESSDWSFILRAGTTTKLAKE
RIERHLFRFWKLVEMIKNHSNINLKFLEDIEEEDKVFPDININDWRK

Sequences:

>Translated_527_residues
MNGQYPKKNVLGQLAIVLHAHLPYVRKNERNSLEEDWLFQAILECYIPLLQSIESSKNENPLNTKLTISLSPTLLSLLDN
KQIQETFPSWIETRNDFLNELPQKEKNASAFLIKNLNDKYLYWQKCSGNLIEKFRVLSISGNLDILTCAATHGYLPILRE
NPETVKGQINTAIRSHENIFGIKPLGIWLPECAYYENLDEILFNSGIRYAILDGHGILNSTPRPRYGVYAPICSKKGVAF
FGRDSESTLPVWSAKDGFPGDKVYREFHKDLGWELPIFKLQKKGISTKRPLGLKFHKITDENVPLGEKEFYLENEAKKKA
SEHADAYLLERSKQLEKLTLSSSFKPLLVAPFDAELFGHWWYEGPFFIENILKNSSKYSIKLTNLKEFLLQKPNLQICDP
SSSSWGQGGYHNYWINDANAWIVPEITKAGSTFVDLCSKNFNNELSLRLFKQAARELLLSESSDWSFILRAGTTTKLAKE
RIERHLFRFWKLVEMIKNHSNINLKFLEDIEEEDKVFPDININDWRK
>Mature_527_residues
MNGQYPKKNVLGQLAIVLHAHLPYVRKNERNSLEEDWLFQAILECYIPLLQSIESSKNENPLNTKLTISLSPTLLSLLDN
KQIQETFPSWIETRNDFLNELPQKEKNASAFLIKNLNDKYLYWQKCSGNLIEKFRVLSISGNLDILTCAATHGYLPILRE
NPETVKGQINTAIRSHENIFGIKPLGIWLPECAYYENLDEILFNSGIRYAILDGHGILNSTPRPRYGVYAPICSKKGVAF
FGRDSESTLPVWSAKDGFPGDKVYREFHKDLGWELPIFKLQKKGISTKRPLGLKFHKITDENVPLGEKEFYLENEAKKKA
SEHADAYLLERSKQLEKLTLSSSFKPLLVAPFDAELFGHWWYEGPFFIENILKNSSKYSIKLTNLKEFLLQKPNLQICDP
SSSSWGQGGYHNYWINDANAWIVPEITKAGSTFVDLCSKNFNNELSLRLFKQAARELLLSESSDWSFILRAGTTTKLAKE
RIERHLFRFWKLVEMIKNHSNINLKFLEDIEEEDKVFPDININDWRK

Specific function: Unknown

COG id: COG1543

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60817; Mature: 60817

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGQYPKKNVLGQLAIVLHAHLPYVRKNERNSLEEDWLFQAILECYIPLLQSIESSKNEN
CCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLNTKLTISLSPTLLSLLDNKQIQETFPSWIETRNDFLNELPQKEKNASAFLIKNLNDKY
CCCEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCE
LYWQKCSGNLIEKFRVLSISGNLDILTCAATHGYLPILRENPETVKGQINTAIRSHENIF
EEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCEE
GIKPLGIWLPECAYYENLDEILFNSGIRYAILDGHGILNSTPRPRYGVYAPICSKKGVAF
ECCCHHHCCCCHHHHCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEE
FGRDSESTLPVWSAKDGFPGDKVYREFHKDLGWELPIFKLQKKGISTKRPLGLKFHKITD
EECCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEECC
ENVPLGEKEFYLENEAKKKASEHADAYLLERSKQLEKLTLSSSFKPLLVAPFDAELFGHW
CCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH
WYEGPFFIENILKNSSKYSIKLTNLKEFLLQKPNLQICDPSSSSWGQGGYHNYWINDANA
CCCCHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEECCCE
WIVPEITKAGSTFVDLCSKNFNNELSLRLFKQAARELLLSESSDWSFILRAGTTTKLAKE
EEEECHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
RIERHLFRFWKLVEMIKNHSNINLKFLEDIEEEDKVFPDININDWRK
HHHHHHHHHHHHHHHHHCCCCCEEEEHHCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNGQYPKKNVLGQLAIVLHAHLPYVRKNERNSLEEDWLFQAILECYIPLLQSIESSKNEN
CCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLNTKLTISLSPTLLSLLDNKQIQETFPSWIETRNDFLNELPQKEKNASAFLIKNLNDKY
CCCEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCE
LYWQKCSGNLIEKFRVLSISGNLDILTCAATHGYLPILRENPETVKGQINTAIRSHENIF
EEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCEE
GIKPLGIWLPECAYYENLDEILFNSGIRYAILDGHGILNSTPRPRYGVYAPICSKKGVAF
ECCCHHHCCCCHHHHCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEE
FGRDSESTLPVWSAKDGFPGDKVYREFHKDLGWELPIFKLQKKGISTKRPLGLKFHKITD
EECCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEECC
ENVPLGEKEFYLENEAKKKASEHADAYLLERSKQLEKLTLSSSFKPLLVAPFDAELFGHW
CCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH
WYEGPFFIENILKNSSKYSIKLTNLKEFLLQKPNLQICDPSSSSWGQGGYHNYWINDANA
CCCCHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEECCCE
WIVPEITKAGSTFVDLCSKNFNNELSLRLFKQAARELLLSESSDWSFILRAGTTTKLAKE
EEEECHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
RIERHLFRFWKLVEMIKNHSNINLKFLEDIEEEDKVFPDININDWRK
HHHHHHHHHHHHHHHHHCCCCCEEEEHHCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA