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The map label for this gene is 78779407

Identifier: 78779407

GI number: 78779407

Start: 942533

End: 942952

Strand: Direct

Name: 78779407

Synonym: PMT9312_1023

Alternate gene names: NA

Gene position: 942533-942952 (Clockwise)

Preceding gene: 78779404

Following gene: 78779408

Centisome position: 55.14

GC content: 27.86

Gene sequence:

>420_bases
ATGAACTCAAAACCAGTTTGGAAAATAGAAAAAATTGTTTTACCTCAACATGCAGACCATGCAGGCGTAATGTGGCACGG
TACATATTTTAATTGGCTTGAAGAAAGCCGAATAAATGCACTTTTAGAAGTAGGTATAAGTTATTTTGAACTAACTAAAA
AAGGCTTAGATTTACCTTTAATCAATACTTCAATAAAATATAGATCTCCTTTATTTCTTGGTGAAAAAATAACCATCGAG
AGTGAATTCAATATTAAAAAAAGTCCTAAGATTAATGTAATTTCAAAATTTCTTAGCAATGAAAATGAAATCTCTACTAT
TGCTGAAGTCAATTTAGTCTTAATAAATAAATTTAATTTTTCTATAATAAGAAAAAGACCCGACTTCTTATCAGAAGCGT
TTATTAAATTAAACGGTTGA

Upstream 100 bases:

>100_bases
TAAATATAGTTTTGGTGATTCTTATATTAATAAAGAATATTAATCTACAATATCAGAATTAGCTTTTTTCATTGAATAAA
GATATTTTCTTAAATAAAAA

Downstream 100 bases:

>100_bases
AATTATAATCCGTTAATTGAACGATTTATTAAATTATTAATTATGAATATATTACAAGTTATTGATTCTTACCAATATGA
AATGGAATCAAGATATCAAG

Product: 4-hydroxybenzoyl-CoA thioesterase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNSKPVWKIEKIVLPQHADHAGVMWHGTYFNWLEESRINALLEVGISYFELTKKGLDLPLINTSIKYRSPLFLGEKITIE
SEFNIKKSPKINVISKFLSNENEISTIAEVNLVLINKFNFSIIRKRPDFLSEAFIKLNG

Sequences:

>Translated_139_residues
MNSKPVWKIEKIVLPQHADHAGVMWHGTYFNWLEESRINALLEVGISYFELTKKGLDLPLINTSIKYRSPLFLGEKITIE
SEFNIKKSPKINVISKFLSNENEISTIAEVNLVLINKFNFSIIRKRPDFLSEAFIKLNG
>Mature_139_residues
MNSKPVWKIEKIVLPQHADHAGVMWHGTYFNWLEESRINALLEVGISYFELTKKGLDLPLINTSIKYRSPLFLGEKITIE
SEFNIKKSPKINVISKFLSNENEISTIAEVNLVLINKFNFSIIRKRPDFLSEAFIKLNG

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 16022; Mature: 16022

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKPVWKIEKIVLPQHADHAGVMWHGTYFNWLEESRINALLEVGISYFELTKKGLDLPL
CCCCCCEEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
INTSIKYRSPLFLGEKITIESEFNIKKSPKINVISKFLSNENEISTIAEVNLVLINKFNF
ECCCCCCCCCEEECCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEHHEEEEEEEEECCCE
SIIRKRPDFLSEAFIKLNG
EEEECCCCHHHHEEEEECC
>Mature Secondary Structure
MNSKPVWKIEKIVLPQHADHAGVMWHGTYFNWLEESRINALLEVGISYFELTKKGLDLPL
CCCCCCEEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
INTSIKYRSPLFLGEKITIESEFNIKKSPKINVISKFLSNENEISTIAEVNLVLINKFNF
ECCCCCCCCCEEECCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEHHEEEEEEEEECCCE
SIIRKRPDFLSEAFIKLNG
EEEECCCCHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]