| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779401
Identifier: 78779401
GI number: 78779401
Start: 939048
End: 939722
Strand: Reverse
Name: 78779401
Synonym: PMT9312_1017
Alternate gene names: NA
Gene position: 939722-939048 (Counterclockwise)
Preceding gene: 78779402
Following gene: 78779399
Centisome position: 54.98
GC content: 36.3
Gene sequence:
>675_bases ATGAAACTATTAGGTTTAAATTCACCTGAAATATTCATAATTTTAGTTGTTTTACTATCAATTTTAGGTCCAAAAAGAAT TGAAAAAGGTACCTTGTTATTCAAAAAGTTATTAAAATTCCTATTAACTAAAGAAGAAAATCAAACTTTAGAAAATTCAG AATTAAAAGCAGAGGAAGCAGAAGAAAGTGAGGTTAAGGAAGAAGCAAAAGAGGCAGAGGTAAAAGCAGAAGCAGAGGAA GCAGAAGAAAGTGAGGTTAAGGAAGAAGCAAAAGAGGCAGAGGTAAAAGCAGAAGCAGAGGAAGCAGAAGAAAGTGAGGT TAAGGAAGAAGCAAAAGAGGCAGAGGTAAAAGCAGAAGCAGAGGAAGCAGAAGAAAGTGAGGTTAAGGAAGAAGCAAAAG AGGCAGAGGTAAAAGCAGAAGCAGAGGAAGCAGAAGAAAGTGAGGTTAAGGAAGAAGCAAAAGAGGCAGAGGTAAAAGCA GAAGCAGAGGAAGCAGAAGAAAGTGAGGTTAAGGAAGAAGCAAAAGAGGCAGAGGTAAAAGCAGAAGCAGAGGAAGCAGA AGAAAGTGAGGTTAAGGAAGAAGCAAAAGAGGCAGAGGTAAAATCAATTAAACCAAAAAAAAGTCTAGCTAAAGATGAAA TAATAGACGTAGAAGTTAATTCTGATAAAAAATAA
Upstream 100 bases:
>100_bases GGATAATTGCATCAAATAGGGATCTTTATTTACCAACTTTTGAGAATAATTAGATTTAATATTAAGCATGTACTAAAATA TAATTAGAATATGGAAATTT
Downstream 100 bases:
>100_bases GAAGTTAAATTAAAAATTATTTAGACAAGTTTTTATTCCAAAATTTATTTCGACAAAATTTTTGTCTATCTTTTGATTCA ATATAAAGTTTGTTTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MKLLGLNSPEIFIILVVLLSILGPKRIEKGTLLFKKLLKFLLTKEENQTLENSELKAEEAEESEVKEEAKEAEVKAEAEE AEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKA EAEEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKSIKPKKSLAKDEIIDVEVNSDKK
Sequences:
>Translated_224_residues MKLLGLNSPEIFIILVVLLSILGPKRIEKGTLLFKKLLKFLLTKEENQTLENSELKAEEAEESEVKEEAKEAEVKAEAEE AEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKA EAEEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKSIKPKKSLAKDEIIDVEVNSDKK >Mature_224_residues MKLLGLNSPEIFIILVVLLSILGPKRIEKGTLLFKKLLKFLLTKEENQTLENSELKAEEAEESEVKEEAKEAEVKAEAEE AEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKA EAEEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKSIKPKKSLAKDEIIDVEVNSDKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24991; Mature: 24991
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLGLNSPEIFIILVVLLSILGPKRIEKGTLLFKKLLKFLLTKEENQTLENSELKAEEA CCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH EESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAEEAEESEVKEEAKEAEVKSIKPKKSLAKDEIIDVEVNSDKK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCEEEEEECCCCC >Mature Secondary Structure MKLLGLNSPEIFIILVVLLSILGPKRIEKGTLLFKKLLKFLLTKEENQTLENSELKAEEA CCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH EESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVKAEAEEAEESEVKEEAKEAEVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAEEAEESEVKEEAKEAEVKSIKPKKSLAKDEIIDVEVNSDKK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA