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The map label for this gene is 78779381

Identifier: 78779381

GI number: 78779381

Start: 926135

End: 926932

Strand: Reverse

Name: 78779381

Synonym: PMT9312_0997

Alternate gene names: NA

Gene position: 926932-926135 (Counterclockwise)

Preceding gene: 78779382

Following gene: 78779380

Centisome position: 54.23

GC content: 22.18

Gene sequence:

>798_bases
ATGATTAATAATTTAAGGTTTGAATTGTCCTTTAAAAATATTTTACAATTAGAAAATAAACTTAAGTTTTGCAAATTTAA
TGAAATAACAAATATCAACATTCCATGCAAGGGTAATATTAAGAAGGAATTGTTTAATTCCACCATTAAATATATATCAA
AAAACTTCCAAGAATTTAATGTAACTTATCACTATAGTCTTTATCATCAATACTCTAAAAATGAAGAAAAATCATATTAT
GATTTTTTAGATTTTTTAAAAAACTCTTATTCAAATAGAAATTATGAAATTCTTCTTTTATCAGGATCTAATAAGAAAAA
AAACTTTGATTCTGTTAATGTTTTAAGTAAAATAAAAAAAGAAAAAGTTGTAAAAATTAAATTAGGTATAGCTCATAATC
CATACTTAAAAAAATATTATAAATCGCCTTCAGAAAGAGATAGGTTTGAGAGGAAAATTTCTACAGGATTAATAAATTCA
GTTTGGTTTCAATATGGCACAGATATTAAAGTACTTCAGAATGAAGTGGCTTTTATTAAGAACAAAGCTAAATATGAAAA
ATTAAATCTATTTGGGAGTTTATTAATTCCTTCAAAACAATTTATAGCAAGGTTTAAATTTCGTCCTTGGAAAGGGGTTC
ACATATCAGAAAAGTATTTATATTCATTAGATGATTTTAATGATTTTACAAGAGAGTTAATTTGTTTTTATAAATATAAT
AATATTACTCCTCTTATTGAAACTGATTTTTCATCATCAGAAAAACTTGATTCTCTTAATAGTTTTTTTAGAAAATAA

Upstream 100 bases:

>100_bases
TAATTAAGAGAAGGAATAATGATAATGTCTCAAAAATTAGAATCATATCAGATGCTTGTTTTCGTTAAAATATTTAAATA
TAAGTTTTATTTACTAATTG

Downstream 100 bases:

>100_bases
AAGATAATTTCAATCAATTTCAGACTTATGAAAAGTGATTCTACATACGACTTAATAATAATAGGAGGAGGAATATCATC
ATGCGTTTTTACTTCAAAGT

Product: amphipathic helix repeat-containing protein

Products: NA

Alternate protein names: Paired Amphipathic Helix Repeat

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MINNLRFELSFKNILQLENKLKFCKFNEITNINIPCKGNIKKELFNSTIKYISKNFQEFNVTYHYSLYHQYSKNEEKSYY
DFLDFLKNSYSNRNYEILLLSGSNKKKNFDSVNVLSKIKKEKVVKIKLGIAHNPYLKKYYKSPSERDRFERKISTGLINS
VWFQYGTDIKVLQNEVAFIKNKAKYEKLNLFGSLLIPSKQFIARFKFRPWKGVHISEKYLYSLDDFNDFTRELICFYKYN
NITPLIETDFSSSEKLDSLNSFFRK

Sequences:

>Translated_265_residues
MINNLRFELSFKNILQLENKLKFCKFNEITNINIPCKGNIKKELFNSTIKYISKNFQEFNVTYHYSLYHQYSKNEEKSYY
DFLDFLKNSYSNRNYEILLLSGSNKKKNFDSVNVLSKIKKEKVVKIKLGIAHNPYLKKYYKSPSERDRFERKISTGLINS
VWFQYGTDIKVLQNEVAFIKNKAKYEKLNLFGSLLIPSKQFIARFKFRPWKGVHISEKYLYSLDDFNDFTRELICFYKYN
NITPLIETDFSSSEKLDSLNSFFRK
>Mature_265_residues
MINNLRFELSFKNILQLENKLKFCKFNEITNINIPCKGNIKKELFNSTIKYISKNFQEFNVTYHYSLYHQYSKNEEKSYY
DFLDFLKNSYSNRNYEILLLSGSNKKKNFDSVNVLSKIKKEKVVKIKLGIAHNPYLKKYYKSPSERDRFERKISTGLINS
VWFQYGTDIKVLQNEVAFIKNKAKYEKLNLFGSLLIPSKQFIARFKFRPWKGVHISEKYLYSLDDFNDFTRELICFYKYN
NITPLIETDFSSSEKLDSLNSFFRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31735; Mature: 31735

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNLRFELSFKNILQLENKLKFCKFNEITNINIPCKGNIKKELFNSTIKYISKNFQEFN
CCCCEEEEEEHHHHHHHHHHCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCHHHEE
VTYHYSLYHQYSKNEEKSYYDFLDFLKNSYSNRNYEILLLSGSNKKKNFDSVNVLSKIKK
EEEEEEEEEHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
EKVVKIKLGIAHNPYLKKYYKSPSERDRFERKISTGLINSVWFQYGTDIKVLQNEVAFIK
CCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NKAKYEKLNLFGSLLIPSKQFIARFKFRPWKGVHISEKYLYSLDDFNDFTRELICFYKYN
HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHEEECCCHHHHHHHHEEEEEEC
NITPLIETDFSSSEKLDSLNSFFRK
CCCCEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MINNLRFELSFKNILQLENKLKFCKFNEITNINIPCKGNIKKELFNSTIKYISKNFQEFN
CCCCEEEEEEHHHHHHHHHHCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCHHHEE
VTYHYSLYHQYSKNEEKSYYDFLDFLKNSYSNRNYEILLLSGSNKKKNFDSVNVLSKIKK
EEEEEEEEEHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
EKVVKIKLGIAHNPYLKKYYKSPSERDRFERKISTGLINSVWFQYGTDIKVLQNEVAFIK
CCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NKAKYEKLNLFGSLLIPSKQFIARFKFRPWKGVHISEKYLYSLDDFNDFTRELICFYKYN
HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHEEECCCHHHHHHHHEEEEEEC
NITPLIETDFSSSEKLDSLNSFFRK
CCCCEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA