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The map label for this gene is 78779378

Identifier: 78779378

GI number: 78779378

Start: 923764

End: 924084

Strand: Reverse

Name: 78779378

Synonym: PMT9312_0994

Alternate gene names: NA

Gene position: 924084-923764 (Counterclockwise)

Preceding gene: 78779380

Following gene: 78779372

Centisome position: 54.07

GC content: 29.28

Gene sequence:

>321_bases
ATGATTACAAAAATTCTAAGTAAACTAAAATCTATTCTATTTAAAAGTCCAGCATCCTCTGAAACTAAATTAAAAAAAGA
AAAAAAAATAACTAAGTCTCCAAAATCTACAAAAACAAAGACAAAATCAAAAAAAGAAAGTTCAAAGAAAAATATTCAAA
CCTTAACGACACTTCCTGGCGTTGGAGCTAAAAGTGCTAAGGCTCTATATGAGGCTGGATTTAAAACAATTAATGCAGTT
ATTGAAGCAGACGAAAACGATCTTCTTGCCGTATCAGGTGTTGGAATAAATCTTGTTAAGAAGCTTAAAAAGCTTAAATA
A

Upstream 100 bases:

>100_bases
ATAAATTATTTTTTTCAATTATTTTTAGTGTTGTTATTAATTCTTTTGGATTTTGATAATATTTAATTGGAAGATATAAT
TTTATTGCTTTAATATATCA

Downstream 100 bases:

>100_bases
TTATTTTTTTAACTTACTAAAATATTAAAAATATAAATTCAAGACTACTTATAAAGCCTAGTTCAAATTATCTTCTTCTT
GCTTTTCTTCTTTGTTGCAA

Product: helix-hairpin-helix DNA-binding, class 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MITKILSKLKSILFKSPASSETKLKKEKKITKSPKSTKTKTKSKKESSKKNIQTLTTLPGVGAKSAKALYEAGFKTINAV
IEADENDLLAVSGVGINLVKKLKKLK

Sequences:

>Translated_106_residues
MITKILSKLKSILFKSPASSETKLKKEKKITKSPKSTKTKTKSKKESSKKNIQTLTTLPGVGAKSAKALYEAGFKTINAV
IEADENDLLAVSGVGINLVKKLKKLK
>Mature_106_residues
MITKILSKLKSILFKSPASSETKLKKEKKITKSPKSTKTKTKSKKESSKKNIQTLTTLPGVGAKSAKALYEAGFKTINAV
IEADENDLLAVSGVGINLVKKLKKLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11489; Mature: 11489

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITKILSKLKSILFKSPASSETKLKKEKKITKSPKSTKTKTKSKKESSKKNIQTLTTLPG
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
VGAKSAKALYEAGFKTINAVIEADENDLLAVSGVGINLVKKLKKLK
CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MITKILSKLKSILFKSPASSETKLKKEKKITKSPKSTKTKTKSKKESSKKNIQTLTTLPG
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
VGAKSAKALYEAGFKTINAVIEADENDLLAVSGVGINLVKKLKKLK
CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA