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The map label for this gene is zam [H]

Identifier: 78779337

GI number: 78779337

Start: 883065

End: 885284

Strand: Direct

Name: zam [H]

Synonym: PMT9312_0953

Alternate gene names: 78779337

Gene position: 883065-885284 (Clockwise)

Preceding gene: 78779336

Following gene: 78779338

Centisome position: 51.67

GC content: 27.16

Gene sequence:

>2220_bases
ATGTTCTCTACATCTTCTATAATTGATAATCTTAATAATTCAGAAGGGTTAGAATATAAAAAATTATGCCGATCATTAAA
AATAACAAAGAAATCTGATAAAGATAAATTAGATATCGCTTTAACAGCTCTAGAAAAACTTGAAATAATAAATAAAAATG
CAGTTAATGAATATTCCTGCACAAAAGATAGCAATCATATAGTCGCCAAAATAAGATGTAGTAGCAAAGGTTATTGCTTT
GCAGTGAGGGAAAAAAACAAAGAAGATATCTACATTAAAGAAAATCTACTTAATTATGCATGGAATGGAGATAAAGTTTT
AGTAAGGATAATAAAAGAGGGTTACAGAAGAAGATCACCTGAGGGAATAGTTGACTGTATTCTTGAAAGATCAAATCAAA
TACTTCTTTCTAAAGTTGAAGAAATAAACAATGATATATATGCTATTCCTATCGACGACAGGATACTTTCTAAAATAAAA
CTTCCAAAAGAGGATAAGAAATACACTTACAAACCAGAAAATAAGAATATAGTTAAAGTTGAGATTGATCGATTTCCCAT
AGGTCAAGAAGAAGGTTTAGGCCATGTTATACAAGAACTAGAATTAAATAATAATGAGGAATTAGATACAGATTTTGTTT
TATCTAAAAGCAATATCGTCGAATTAGACAATGAAAATCTTGTTAAATCTAAGAAGATAGAAAAAAGGGAAAGAATAGAC
TTAACAGATAAAAACTCTTATTTATTCAAAAGTTGGAAGTCTGATAATTCTCCAATGCTCCCAATAATTCAAATAGAGCA
GGAAAAAAATAAAAATACTAAACTTTGGATACATACAAATAATCTTGCAGAAATAGTAGAACTAAATAATAAAAAGGCCT
TAGAAATACTTAATAGCTTTGAATCATTACCCTTATTGAATAATTGGAAACCCTACCATAGTGAATCCATAAGAAATACT
TCTGAATTTAAATTAGGTGAAAAGAATGAAGCAATAAGCCTATGCTTGCATTTAGATAGCGATAATGAAATAACTAAATG
GTCATTTCATCTTACTTTAGTAAAATGCACTCTAATTATTGGAAGTGATCATACTGACGCCCTTCTATCAAGAAAAAGTA
AAACTAGAATAACCTCAAGGTTACTCAAACCAATAAAGCAATATATCGAAGATGTGGATAAAATACTTGAAATTTCTACT
TCATTCAGACAAAGACATCTCTTGGAAGGTAAAGTTGAAATCCCTGCGCCACATAATAAAATTGAATCCTTAGACGAATT
TTTTATTCACAACCCTGCTGAAAATTCAAAAGGATATTTTGAACCATTAAAAAAAGAAGATTGCCAAACATACCTTTCTC
CAATACTACATGAAGCGAATTTAATATGGTTCAAACATTCAAATCAACTTGGCTTAAAAAGTGCAGGTTACTTTTCAAAG
GGAATAGATTACATTAATGCAAATGAACTCATCAAATATTCAGAATTTGTTGATAATGAAGTAGAGCTTAATGAAGATGG
TAATTTATCATTTAGTCAAATAATTAAGTTATGCGGCGATGATAATAAAAAAAGAATCTTACATAAACTTTTAATTAATG
AATTTAAGGAAAATGAAGTAAACCTGATTTCTAATAATGCAGATAACAATGAATCAGAAAAACTATATATTTCGCCATGG
ACAATTCCTGGATATGACTTCACAAATCTTATTAACCAGTACTGTATTTTTAATATGATAATAAATGGTAAGAAATCAAA
GAAAAATAATATTAATGAAATAAACATATTGGAAAGTGATTCGTTAAATTTAATAGATTGGGATATATTTAATTCGTCAA
TTATAAAGAATATAGATACATTATTTAATAAATTTATAATAGATAAACTTAATGAATATAAGTGCAAAATAAACCAATAT
AAATTAAATATGATAAGTATAAAAAAAGTAAGAAAGGCTGAGAATTTATTAGGCAATATTTACAATGGGTTTATATTGTC
AGTTCAAAGTTATGGTTTCTTTGTTGAGATATCAGATCTAAATGTGGAAGGTCTTGTCCACGTCAGCACCCTTAATAATG
ATTGGTATGAATATAGATCAAGACAAAATTTATTGATTGGTAGGAAATCTAAGAAATCATATAAAGTTGGAGATGAAATA
GAAGTTAAAATTATAAAAGTTGATATTCTTAAATATCAAATTGATTTAGAGTTAACATAA

Upstream 100 bases:

>100_bases
AAGAAAAAGAAGACAATTAAAATAATTAGTTTTAAGCTTGGATAAAAGGTGTAATAATGAAGTATATACAACTTAAATAA
TTTATAATTTTTCTATTACT

Downstream 100 bases:

>100_bases
TTAAATTGTCAAAAATATATTATGGAAAAAAGAAAAAGAAAATTTATATATAACTTTTATAATGATATTTAGGAAAAAAT
TTTTATTATTAACTCTTTTC

Product: RNA binding S1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 739; Mature: 739

Protein sequence:

>739_residues
MFSTSSIIDNLNNSEGLEYKKLCRSLKITKKSDKDKLDIALTALEKLEIINKNAVNEYSCTKDSNHIVAKIRCSSKGYCF
AVREKNKEDIYIKENLLNYAWNGDKVLVRIIKEGYRRRSPEGIVDCILERSNQILLSKVEEINNDIYAIPIDDRILSKIK
LPKEDKKYTYKPENKNIVKVEIDRFPIGQEEGLGHVIQELELNNNEELDTDFVLSKSNIVELDNENLVKSKKIEKRERID
LTDKNSYLFKSWKSDNSPMLPIIQIEQEKNKNTKLWIHTNNLAEIVELNNKKALEILNSFESLPLLNNWKPYHSESIRNT
SEFKLGEKNEAISLCLHLDSDNEITKWSFHLTLVKCTLIIGSDHTDALLSRKSKTRITSRLLKPIKQYIEDVDKILEIST
SFRQRHLLEGKVEIPAPHNKIESLDEFFIHNPAENSKGYFEPLKKEDCQTYLSPILHEANLIWFKHSNQLGLKSAGYFSK
GIDYINANELIKYSEFVDNEVELNEDGNLSFSQIIKLCGDDNKKRILHKLLINEFKENEVNLISNNADNNESEKLYISPW
TIPGYDFTNLINQYCIFNMIINGKKSKKNNINEINILESDSLNLIDWDIFNSSIIKNIDTLFNKFIIDKLNEYKCKINQY
KLNMISIKKVRKAENLLGNIYNGFILSVQSYGFFVEISDLNVEGLVHVSTLNNDWYEYRSRQNLLIGRKSKKSYKVGDEI
EVKIIKVDILKYQIDLELT

Sequences:

>Translated_739_residues
MFSTSSIIDNLNNSEGLEYKKLCRSLKITKKSDKDKLDIALTALEKLEIINKNAVNEYSCTKDSNHIVAKIRCSSKGYCF
AVREKNKEDIYIKENLLNYAWNGDKVLVRIIKEGYRRRSPEGIVDCILERSNQILLSKVEEINNDIYAIPIDDRILSKIK
LPKEDKKYTYKPENKNIVKVEIDRFPIGQEEGLGHVIQELELNNNEELDTDFVLSKSNIVELDNENLVKSKKIEKRERID
LTDKNSYLFKSWKSDNSPMLPIIQIEQEKNKNTKLWIHTNNLAEIVELNNKKALEILNSFESLPLLNNWKPYHSESIRNT
SEFKLGEKNEAISLCLHLDSDNEITKWSFHLTLVKCTLIIGSDHTDALLSRKSKTRITSRLLKPIKQYIEDVDKILEIST
SFRQRHLLEGKVEIPAPHNKIESLDEFFIHNPAENSKGYFEPLKKEDCQTYLSPILHEANLIWFKHSNQLGLKSAGYFSK
GIDYINANELIKYSEFVDNEVELNEDGNLSFSQIIKLCGDDNKKRILHKLLINEFKENEVNLISNNADNNESEKLYISPW
TIPGYDFTNLINQYCIFNMIINGKKSKKNNINEINILESDSLNLIDWDIFNSSIIKNIDTLFNKFIIDKLNEYKCKINQY
KLNMISIKKVRKAENLLGNIYNGFILSVQSYGFFVEISDLNVEGLVHVSTLNNDWYEYRSRQNLLIGRKSKKSYKVGDEI
EVKIIKVDILKYQIDLELT
>Mature_739_residues
MFSTSSIIDNLNNSEGLEYKKLCRSLKITKKSDKDKLDIALTALEKLEIINKNAVNEYSCTKDSNHIVAKIRCSSKGYCF
AVREKNKEDIYIKENLLNYAWNGDKVLVRIIKEGYRRRSPEGIVDCILERSNQILLSKVEEINNDIYAIPIDDRILSKIK
LPKEDKKYTYKPENKNIVKVEIDRFPIGQEEGLGHVIQELELNNNEELDTDFVLSKSNIVELDNENLVKSKKIEKRERID
LTDKNSYLFKSWKSDNSPMLPIIQIEQEKNKNTKLWIHTNNLAEIVELNNKKALEILNSFESLPLLNNWKPYHSESIRNT
SEFKLGEKNEAISLCLHLDSDNEITKWSFHLTLVKCTLIIGSDHTDALLSRKSKTRITSRLLKPIKQYIEDVDKILEIST
SFRQRHLLEGKVEIPAPHNKIESLDEFFIHNPAENSKGYFEPLKKEDCQTYLSPILHEANLIWFKHSNQLGLKSAGYFSK
GIDYINANELIKYSEFVDNEVELNEDGNLSFSQIIKLCGDDNKKRILHKLLINEFKENEVNLISNNADNNESEKLYISPW
TIPGYDFTNLINQYCIFNMIINGKKSKKNNINEINILESDSLNLIDWDIFNSSIIKNIDTLFNKFIIDKLNEYKCKINQY
KLNMISIKKVRKAENLLGNIYNGFILSVQSYGFFVEISDLNVEGLVHVSTLNNDWYEYRSRQNLLIGRKSKKSYKVGDEI
EVKIIKVDILKYQIDLELT

Specific function: Not known; control resistance to the carbonic anhydrase inhibitor acetazolamide [H]

COG id: COG0557

COG function: function code K; Exoribonuclease R

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082383, Length=82, Percent_Identity=41.4634146341463, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011129
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR013223
- InterPro:   IPR001900
- InterPro:   IPR022966
- InterPro:   IPR011805 [H]

Pfam domain/function: PF08206 OB_RNB; PF00773 RNB; PF00575 S1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 85869; Mature: 85869

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSTSSIIDNLNNSEGLEYKKLCRSLKITKKSDKDKLDIALTALEKLEIINKNAVNEYSC
CCCCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
TKDSNHIVAKIRCSSKGYCFAVREKNKEDIYIKENLLNYAWNGDKVLVRIIKEGYRRRSP
CCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHCCCC
EGIVDCILERSNQILLSKVEEINNDIYAIPIDDRILSKIKLPKEDKKYTYKPENKNIVKV
HHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCCEECCCCCCEEEE
EIDRFPIGQEEGLGHVIQELELNNNEELDTDFVLSKSNIVELDNENLVKSKKIEKRERID
EECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHCCC
LTDKNSYLFKSWKSDNSPMLPIIQIEQEKNKNTKLWIHTNNLAEIVELNNKKALEILNSF
CCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHCCCHHHHHHHHHH
ESLPLLNNWKPYHSESIRNTSEFKLGEKNEAISLCLHLDSDNEITKWSFHLTLVKCTLII
HCCCCCCCCCCCCCHHCCCCHHCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEEEEEE
GSDHTDALLSRKSKTRITSRLLKPIKQYIEDVDKILEISTSFRQRHLLEGKVEIPAPHNK
CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHH
IESLDEFFIHNPAENSKGYFEPLKKEDCQTYLSPILHEANLIWFKHSNQLGLKSAGYFSK
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHH
GIDYINANELIKYSEFVDNEVELNEDGNLSFSQIIKLCGDDNKKRILHKLLINEFKENEV
CCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCE
NLISNNADNNESEKLYISPWTIPGYDFTNLINQYCIFNMIINGKKSKKNNINEINILESD
EEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECC
SLNLIDWDIFNSSIIKNIDTLFNKFIIDKLNEYKCKINQYKLNMISIKKVRKAENLLGNI
CCCEEEEHHHCHHHHHHHHHHHHHHHHHCCCHHEEEEEEEEEEEEHHHHHHHHHHHHHHH
YNGFILSVQSYGFFVEISDLNVEGLVHVSTLNNDWYEYRSRQNLLIGRKSKKSYKVGDEI
CCCEEEEEECCEEEEEEECCCCCEEEEEEECCCHHHHHHCCCCEEEECCCCCCCCCCCCE
EVKIIKVDILKYQIDLELT
EEEEEEEEEEEEEEEEEEC
>Mature Secondary Structure
MFSTSSIIDNLNNSEGLEYKKLCRSLKITKKSDKDKLDIALTALEKLEIINKNAVNEYSC
CCCCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
TKDSNHIVAKIRCSSKGYCFAVREKNKEDIYIKENLLNYAWNGDKVLVRIIKEGYRRRSP
CCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHCCCC
EGIVDCILERSNQILLSKVEEINNDIYAIPIDDRILSKIKLPKEDKKYTYKPENKNIVKV
HHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCCEECCCCCCEEEE
EIDRFPIGQEEGLGHVIQELELNNNEELDTDFVLSKSNIVELDNENLVKSKKIEKRERID
EECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHCCC
LTDKNSYLFKSWKSDNSPMLPIIQIEQEKNKNTKLWIHTNNLAEIVELNNKKALEILNSF
CCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHCCCHHHHHHHHHH
ESLPLLNNWKPYHSESIRNTSEFKLGEKNEAISLCLHLDSDNEITKWSFHLTLVKCTLII
HCCCCCCCCCCCCCHHCCCCHHCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEEEEEE
GSDHTDALLSRKSKTRITSRLLKPIKQYIEDVDKILEISTSFRQRHLLEGKVEIPAPHNK
CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHH
IESLDEFFIHNPAENSKGYFEPLKKEDCQTYLSPILHEANLIWFKHSNQLGLKSAGYFSK
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHH
GIDYINANELIKYSEFVDNEVELNEDGNLSFSQIIKLCGDDNKKRILHKLLINEFKENEV
CCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCE
NLISNNADNNESEKLYISPWTIPGYDFTNLINQYCIFNMIINGKKSKKNNINEINILESD
EEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECC
SLNLIDWDIFNSSIIKNIDTLFNKFIIDKLNEYKCKINQYKLNMISIKKVRKAENLLGNI
CCCEEEEHHHCHHHHHHHHHHHHHHHHHCCCHHEEEEEEEEEEEEHHHHHHHHHHHHHHH
YNGFILSVQSYGFFVEISDLNVEGLVHVSTLNNDWYEYRSRQNLLIGRKSKKSYKVGDEI
CCCEEEEEECCEEEEEEECCCCCEEEEEEECCCHHHHHHCCCCEEEECCCCCCCCCCCCE
EVKIIKVDILKYQIDLELT
EEEEEEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7727754; 8905231 [H]