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The map label for this gene is dnaJ [H]

Identifier: 78779288

GI number: 78779288

Start: 835500

End: 836459

Strand: Direct

Name: dnaJ [H]

Synonym: PMT9312_0904

Alternate gene names: 78779288

Gene position: 835500-836459 (Clockwise)

Preceding gene: 78779287

Following gene: 78779289

Centisome position: 48.88

GC content: 32.92

Gene sequence:

>960_bases
ATGGTAATTCTAGGGATGATGATCCATGGGACAATGACTATTTCCTCTAAAAAAGACTATTTGTCTATTTTGGGTTTATC
CCATGATTATGACGATAATGAACTTAAAAAAGCCTTTAGAAGAGAAGCAAGAAAATGGCATCCAGATTTAAATAAAAATG
ATCTAAATGCAGAAGAAAGATTTAAATTAATTAACGAAGCATACGAATATCTACGTGATCCAAATAAAAGAAATGATAAT
TCGGAGGTAAATATTCGGGAAGACTACGAAAATAACAATTTCAAGACAGGTTTTCCTGATTTCCAAGATTATCTTGATTC
ATTATTTGGATATGAATACAACTCTAAGAATTATGAAGAAAACAATAATGGATCATTTGAGGATGAATCGATAAATATAG
ATAATGAAGAATTTAATAATTATGAATACCCTACAACATCTCCAGAAGAACCACCTCCAGTTAAACTCCATCAAGATATT
GAAACAATTATCGAATTAACTCCTGATGAGGCCTTACGTGGAGCTTCAATTTTAATAGAACTTGAGGATCAAACTGTAGT
TGAAGTTGATACACCTCCTTTCGCTGGAGATGGATGGAGATTAAGACTTGAAAATATTGCAAGAGGAGGAAAAGATCATT
ATTTACAGTTAAAAGTTCAAACCGAGAGTGGTCTAAGAATTGATGGTTTACGAGTTCTTTATAAATTAGAGTTGTTCCCT
CATGATGCTCTTCTTGGATGTGCAGTAGAGGTTCCTACCCTTGATGGAAATGTTACCCTTCAAGTACCTCCAAAATCATC
TACCGGAAGAATGTTACGTTTGAAGGGTAGGGGTTTAACGTTCGAAGAAAATGTAGGTGATCAATATGTTGAAATCTTGG
TAGTTATACCAGCTGATATTAATGATGAAGAAATTGCTTTATATACAAGATTACAAGAATTATCACTTTCTGATTCTTAA

Upstream 100 bases:

>100_bases
AATACATTTGGATCACTAAAGGATGAACTGTTTTCAGATGACTATTGGGATGATGATCCTTGGGATAATCAAATGAATAG
AAATTATAGAAATTCGAGGT

Downstream 100 bases:

>100_bases
TCAAATATTATATAAAAAGAAAAATCGAAACTTATGAACGCATTTGTTCTTTTATATAATTCAGGAACAGATAAGGAAGG
AATTCATTCAATCGAACTTA

Product: DnaJ-class molecular chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MVILGMMIHGTMTISSKKDYLSILGLSHDYDDNELKKAFRREARKWHPDLNKNDLNAEERFKLINEAYEYLRDPNKRNDN
SEVNIREDYENNNFKTGFPDFQDYLDSLFGYEYNSKNYEENNNGSFEDESINIDNEEFNNYEYPTTSPEEPPPVKLHQDI
ETIIELTPDEALRGASILIELEDQTVVEVDTPPFAGDGWRLRLENIARGGKDHYLQLKVQTESGLRIDGLRVLYKLELFP
HDALLGCAVEVPTLDGNVTLQVPPKSSTGRMLRLKGRGLTFEENVGDQYVEILVVIPADINDEEIALYTRLQELSLSDS

Sequences:

>Translated_319_residues
MVILGMMIHGTMTISSKKDYLSILGLSHDYDDNELKKAFRREARKWHPDLNKNDLNAEERFKLINEAYEYLRDPNKRNDN
SEVNIREDYENNNFKTGFPDFQDYLDSLFGYEYNSKNYEENNNGSFEDESINIDNEEFNNYEYPTTSPEEPPPVKLHQDI
ETIIELTPDEALRGASILIELEDQTVVEVDTPPFAGDGWRLRLENIARGGKDHYLQLKVQTESGLRIDGLRVLYKLELFP
HDALLGCAVEVPTLDGNVTLQVPPKSSTGRMLRLKGRGLTFEENVGDQYVEILVVIPADINDEEIALYTRLQELSLSDS
>Mature_319_residues
MVILGMMIHGTMTISSKKDYLSILGLSHDYDDNELKKAFRREARKWHPDLNKNDLNAEERFKLINEAYEYLRDPNKRNDN
SEVNIREDYENNNFKTGFPDFQDYLDSLFGYEYNSKNYEENNNGSFEDESINIDNEEFNNYEYPTTSPEEPPPVKLHQDI
ETIIELTPDEALRGASILIELEDQTVVEVDTPPFAGDGWRLRLENIARGGKDHYLQLKVQTESGLRIDGLRVLYKLELFP
HDALLGCAVEVPTLDGNVTLQVPPKSSTGRMLRLKGRGLTFEENVGDQYVEILVVIPADINDEEIALYTRLQELSLSDS

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI6631085, Length=333, Percent_Identity=27.9279279279279, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI194306642, Length=120, Percent_Identity=35.8333333333333, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI194306640, Length=120, Percent_Identity=35.8333333333333, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI5453690, Length=60, Percent_Identity=53.3333333333333, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI56549115, Length=61, Percent_Identity=54.0983606557377, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI201862518, Length=61, Percent_Identity=54.0983606557377, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI201862587, Length=61, Percent_Identity=54.0983606557377, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1786197, Length=345, Percent_Identity=27.536231884058, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1787235, Length=314, Percent_Identity=28.6624203821656, Blast_Score=111, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI115532378, Length=77, Percent_Identity=42.8571428571429, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24658562, Length=306, Percent_Identity=25.4901960784314, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24658555, Length=306, Percent_Identity=25.4901960784314, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 36660; Mature: 36660

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVILGMMIHGTMTISSKKDYLSILGLSHDYDDNELKKAFRREARKWHPDLNKNDLNAEER
CEEEEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
FKLINEAYEYLRDPNKRNDNSEVNIREDYENNNFKTGFPDFQDYLDSLFGYEYNSKNYEE
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
NNNGSFEDESINIDNEEFNNYEYPTTSPEEPPPVKLHQDIETIIELTPDEALRGASILIE
CCCCCCCCCEECCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCEEEEE
LEDQTVVEVDTPPFAGDGWRLRLENIARGGKDHYLQLKVQTESGLRIDGLRVLYKLELFP
ECCCEEEEECCCCCCCCCCEEEEHHHHCCCCCEEEEEEEECCCCCEECCEEEEEEEEECC
HDALLGCAVEVPTLDGNVTLQVPPKSSTGRMLRLKGRGLTFEENVGDQYVEILVVIPADI
CCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEECCCCEEHHCCCCCEEEEEEEECCCC
NDEEIALYTRLQELSLSDS
CCCCEEEEEHHHHHCCCCC
>Mature Secondary Structure
MVILGMMIHGTMTISSKKDYLSILGLSHDYDDNELKKAFRREARKWHPDLNKNDLNAEER
CEEEEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
FKLINEAYEYLRDPNKRNDNSEVNIREDYENNNFKTGFPDFQDYLDSLFGYEYNSKNYEE
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
NNNGSFEDESINIDNEEFNNYEYPTTSPEEPPPVKLHQDIETIIELTPDEALRGASILIE
CCCCCCCCCEECCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCEEEEE
LEDQTVVEVDTPPFAGDGWRLRLENIARGGKDHYLQLKVQTESGLRIDGLRVLYKLELFP
ECCCEEEEECCCCCCCCCCEEEEHHHHCCCCCEEEEEEEECCCCCEECCEEEEEEEEECC
HDALLGCAVEVPTLDGNVTLQVPPKSSTGRMLRLKGRGLTFEENVGDQYVEILVVIPADI
CCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEECCCCEEHHCCCCCEEEEEEEECCCC
NDEEIALYTRLQELSLSDS
CCCCEEEEEHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9240461; 8003021; 7811295 [H]