| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is ilvA [H]
Identifier: 78779276
GI number: 78779276
Start: 823431
End: 824978
Strand: Reverse
Name: ilvA [H]
Synonym: PMT9312_0892
Alternate gene names: 78779276
Gene position: 824978-823431 (Counterclockwise)
Preceding gene: 78779278
Following gene: 78779275
Centisome position: 48.27
GC content: 31.33
Gene sequence:
>1548_bases ATGTATATGAATGATTATTTTGAAAAAATACTTCAGGCTGAAGTCTATGAAGTAGCAAAAAAAACACCACTAGAAAAAGC ACATAATTTAAGTAATAAGCTTAATAATGAAGTTTTCTTAAAAAGAGAAGATCTTCAAGATGTGTTTTCATTCAAAATAA GAGGGGCATTTAACAAAATGAGTAAGCTCACTAAATCGCAGCTTGCTCAAGGAGTAATTACATCAAGTGCTGGAAATCAT GCTCAGGGGGTAGCACTAAGTGCTCTCAAGTTAAATTGCCAAGCAACCATATTAATGCCCCTTACAACGCCTCTAGTAAA AATTAATGCAGTAAAAAATCTAAAGGCAAAAGTTATATTATATGGAGATAATTATGATGAAACTTATAGAGAGGCAATAA GGATTAGCAAAGAAAGAAATTTATGTTTTATTCATCCTTTTGATGATCCTGAAGTAATAGCAGGACAAGGAACTATAGCT ATTGAACTTGAACAACAATTAAAAGACAAACCTTATGCTATTTATATTGCTGTTGGTGGTGGCGGATTGATATCAGGAAT ATCCTTATACATTAAGAAAGTTTGGCCTGAAGTAAAAATAATTGGAGTAGAGCCTCAAGACGCAGATGCTATGTCAAAAT CCTTAGAAGAATCAAAAATTGTTGAATTAGCTTCAGTAGGACAGTTTGCAGATGGAGTAGCCGTTAAAAAAGTTGGTAAT AATACTTTTGATATTGGAAGAAAATATATAGATAAAATGATTAGGGTTAACACAGATGAAATATGTGCTGCAATCAAAGA TGTTTTTGAAGACACTAGATCGATACTAGAGCCTGCAGGTGCATTATCAATTGCTGGAATGAAAAAAGATATTTTAAATT CGAATCATTCAAATAAAAACATGGTTGCTATTGCATGCGGTGCAAATATGAACTTTGAGAGGCTTAGATTTGTAGCAGAA AGAGCGGAACTTGGAGAATGCAAAGAGGTTATGATGGCAGTTGAAATTCCTGAATGTGCTGGTAGTTTAATAGATTTTTG TAAGTTGCTTAAAAATAGAAATTTAACTGAATTTAGCTATAGAATGTCCAACTCTATAAATGCACAGATCTTTGTAGGAG TTGAAGTTAATGGAATAGTTGATAAAAAAATTCTCTTGGATGAATTTAGGAATTCGCAGTACAAATTTATTGATTTAAGT GAGGATGAATTATCCAAAAATCATCTAAGACATATGGTAGGTGGACGATTACCAAAGAATCTCAAAGAAATTAATAATAG AAGTTTTGTTGAGTTGTTATATAGATTTGAATTTCCCGAAAAACCTGGAGCATTAATAAATTTCTTAAATAATATGAAAT CTAATTGGTCAATAAGTGTATTTCATTATCGGAATTACGGTGCTGATGTAGGAAAAATTGTTATTGGAGTATTAATCGAT AAAAGTGAAATTACGGAATGGAACAATTTTGTAAAATTTTTAGGTTACAAATACTGGGATGAAACTAAAAACGATACATA TAAATTATTCCTTGGTGCACCAGAATAA
Upstream 100 bases:
>100_bases TAGTTATACATATAATTTAAAACGCCGAGGTGCAAAATGAGTAATTTTTATGAAATCGATCATGTAATGTTTTATTAGAT TAATAATTAATGCTAAAAAT
Downstream 100 bases:
>100_bases ATATGAGTTATCTTAGGAAAGATTTCGGTAATAACAATTATTAAATCTGATCTAATTAATAAGCAACTATCTGATATAGA TCTAGTTACCAGAATTGAAG
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MYMNDYFEKILQAEVYEVAKKTPLEKAHNLSNKLNNEVFLKREDLQDVFSFKIRGAFNKMSKLTKSQLAQGVITSSAGNH AQGVALSALKLNCQATILMPLTTPLVKINAVKNLKAKVILYGDNYDETYREAIRISKERNLCFIHPFDDPEVIAGQGTIA IELEQQLKDKPYAIYIAVGGGGLISGISLYIKKVWPEVKIIGVEPQDADAMSKSLEESKIVELASVGQFADGVAVKKVGN NTFDIGRKYIDKMIRVNTDEICAAIKDVFEDTRSILEPAGALSIAGMKKDILNSNHSNKNMVAIACGANMNFERLRFVAE RAELGECKEVMMAVEIPECAGSLIDFCKLLKNRNLTEFSYRMSNSINAQIFVGVEVNGIVDKKILLDEFRNSQYKFIDLS EDELSKNHLRHMVGGRLPKNLKEINNRSFVELLYRFEFPEKPGALINFLNNMKSNWSISVFHYRNYGADVGKIVIGVLID KSEITEWNNFVKFLGYKYWDETKNDTYKLFLGAPE
Sequences:
>Translated_515_residues MYMNDYFEKILQAEVYEVAKKTPLEKAHNLSNKLNNEVFLKREDLQDVFSFKIRGAFNKMSKLTKSQLAQGVITSSAGNH AQGVALSALKLNCQATILMPLTTPLVKINAVKNLKAKVILYGDNYDETYREAIRISKERNLCFIHPFDDPEVIAGQGTIA IELEQQLKDKPYAIYIAVGGGGLISGISLYIKKVWPEVKIIGVEPQDADAMSKSLEESKIVELASVGQFADGVAVKKVGN NTFDIGRKYIDKMIRVNTDEICAAIKDVFEDTRSILEPAGALSIAGMKKDILNSNHSNKNMVAIACGANMNFERLRFVAE RAELGECKEVMMAVEIPECAGSLIDFCKLLKNRNLTEFSYRMSNSINAQIFVGVEVNGIVDKKILLDEFRNSQYKFIDLS EDELSKNHLRHMVGGRLPKNLKEINNRSFVELLYRFEFPEKPGALINFLNNMKSNWSISVFHYRNYGADVGKIVIGVLID KSEITEWNNFVKFLGYKYWDETKNDTYKLFLGAPE >Mature_515_residues MYMNDYFEKILQAEVYEVAKKTPLEKAHNLSNKLNNEVFLKREDLQDVFSFKIRGAFNKMSKLTKSQLAQGVITSSAGNH AQGVALSALKLNCQATILMPLTTPLVKINAVKNLKAKVILYGDNYDETYREAIRISKERNLCFIHPFDDPEVIAGQGTIA IELEQQLKDKPYAIYIAVGGGGLISGISLYIKKVWPEVKIIGVEPQDADAMSKSLEESKIVELASVGQFADGVAVKKVGN NTFDIGRKYIDKMIRVNTDEICAAIKDVFEDTRSILEPAGALSIAGMKKDILNSNHSNKNMVAIACGANMNFERLRFVAE RAELGECKEVMMAVEIPECAGSLIDFCKLLKNRNLTEFSYRMSNSINAQIFVGVEVNGIVDKKILLDEFRNSQYKFIDLS EDELSKNHLRHMVGGRLPKNLKEINNRSFVELLYRFEFPEKPGALINFLNNMKSNWSISVFHYRNYGADVGKIVIGVLID KSEITEWNNFVKFLGYKYWDETKNDTYKLFLGAPE
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=300, Percent_Identity=33.6666666666667, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI33469958, Length=311, Percent_Identity=30.8681672025724, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI19923959, Length=313, Percent_Identity=29.073482428115, Blast_Score=89, Evalue=1e-17, Organism=Escherichia coli, GI1790207, Length=512, Percent_Identity=45.3125, Blast_Score=455, Evalue=1e-129, Organism=Escherichia coli, GI1789505, Length=295, Percent_Identity=37.9661016949153, Blast_Score=181, Evalue=1e-46, Organism=Caenorhabditis elegans, GI71991565, Length=333, Percent_Identity=30.9309309309309, Blast_Score=148, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17537387, Length=364, Percent_Identity=31.043956043956, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI17508781, Length=296, Percent_Identity=30.0675675675676, Blast_Score=127, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6320930, Length=527, Percent_Identity=45.3510436432638, Blast_Score=447, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6322631, Length=304, Percent_Identity=35.8552631578947, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6319788, Length=326, Percent_Identity=27.6073619631902, Blast_Score=95, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6322024, Length=188, Percent_Identity=28.1914893617021, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI21355833, Length=331, Percent_Identity=34.7432024169184, Blast_Score=165, Evalue=8e-41, Organism=Drosophila melanogaster, GI24645328, Length=252, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=2e-25,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 58060; Mature: 58060
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYMNDYFEKILQAEVYEVAKKTPLEKAHNLSNKLNNEVFLKREDLQDVFSFKIRGAFNKM CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH SKLTKSQLAQGVITSSAGNHAQGVALSALKLNCQATILMPLTTPLVKINAVKNLKAKVIL HHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCEEEEEEECCCCEEEEEEECCCEEEEEE YGDNYDETYREAIRISKERNLCFIHPFDDPEVIAGQGTIAIELEQQLKDKPYAIYIAVGG EECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEECCCEEEEEEHHHHCCCCEEEEEEECC GGLISGISLYIKKVWPEVKIIGVEPQDADAMSKSLEESKIVELASVGQFADGVAVKKVGN CHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHCCEEEEECCC NTFDIGRKYIDKMIRVNTDEICAAIKDVFEDTRSILEPAGALSIAGMKKDILNSNHSNKN CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHCCCCCCCC MVAIACGANMNFERLRFVAERAELGECKEVMMAVEIPECAGSLIDFCKLLKNRNLTEFSY EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCCHHHH RMSNSINAQIFVGVEVNGIVDKKILLDEFRNSQYKFIDLSEDELSKNHLRHMVGGRLPKN HHCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCHH LKEINNRSFVELLYRFEFPEKPGALINFLNNMKSNWSISVFHYRNYGADVGKIVIGVLID HHHHCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCHHHEEEEEEEC KSEITEWNNFVKFLGYKYWDETKNDTYKLFLGAPE CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC >Mature Secondary Structure MYMNDYFEKILQAEVYEVAKKTPLEKAHNLSNKLNNEVFLKREDLQDVFSFKIRGAFNKM CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH SKLTKSQLAQGVITSSAGNHAQGVALSALKLNCQATILMPLTTPLVKINAVKNLKAKVIL HHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCEEEEEEECCCCEEEEEEECCCEEEEEE YGDNYDETYREAIRISKERNLCFIHPFDDPEVIAGQGTIAIELEQQLKDKPYAIYIAVGG EECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEECCCEEEEEEHHHHCCCCEEEEEEECC GGLISGISLYIKKVWPEVKIIGVEPQDADAMSKSLEESKIVELASVGQFADGVAVKKVGN CHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHCCEEEEECCC NTFDIGRKYIDKMIRVNTDEICAAIKDVFEDTRSILEPAGALSIAGMKKDILNSNHSNKN CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHCCCCCCCC MVAIACGANMNFERLRFVAERAELGECKEVMMAVEIPECAGSLIDFCKLLKNRNLTEFSY EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCCHHHH RMSNSINAQIFVGVEVNGIVDKKILLDEFRNSQYKFIDLSEDELSKNHLRHMVGGRLPKN HHCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCHH LKEINNRSFVELLYRFEFPEKPGALINFLNNMKSNWSISVFHYRNYGADVGKIVIGVLID HHHHCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCHHHEEEEEEEC KSEITEWNNFVKFLGYKYWDETKNDTYKLFLGAPE CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA