Click here to switch to the map view.

The map label for this gene is tadA [H]

Identifier: 78779266

GI number: 78779266

Start: 814508

End: 815023

Strand: Reverse

Name: tadA [H]

Synonym: PMT9312_0882

Alternate gene names: 78779266

Gene position: 815023-814508 (Counterclockwise)

Preceding gene: 78779268

Following gene: 78779264

Centisome position: 47.68

GC content: 32.75

Gene sequence:

>516_bases
ATGAGGAATATTTTTGAAAATGGAAATAGTAATAATGATCTAAATAGAGGAAGAAAGAATTTAAATTACATTAAATGGAT
GAATTCTATATTAAGAAGATCAGAAGAAATTGGAAAAGTTGAGCTGCCAATCTCTTCAATAATTTTAGATGAAAGAGGAA
GATGTATTGGAAGAGGGGTTAACAGGAGAAGTGTAAATAAAGACCCATTAGGTCATGCTGAAATAATGGCATTAAGGCAG
GCATCTCTAATAAAAAATGATTGGAGGTTTAATGAATGTATTACTATCACAAATTTAGAACCATGTACCATGTGTGCATC
GGCGCTTATTCAAGCGAGGATGGGTAAAGTTGTTTTTGGTGCTTACGATAAGAAAAGAGGTGGATTGGGAGGATCAATTG
ACTTATCAAAGCATAAAAGTTCTCATCACAAGATGGAAATTGTAGGGGGTATCTTAGAAGAAGAATGCAGTCAAATTTTA
CAATTATGGTTTAAAAAGTTGAGGACTCAAAAATAG

Upstream 100 bases:

>100_bases
AGTCCCTAAATACGAAGGGAAGTATATATCTTTTTTATTAATTAAATCTTCAGTCATCAGATAAGATATCTATTAATAAG
TCTATTCTGAATATTGTTAA

Downstream 100 bases:

>100_bases
AATATTTCTTTAACTCAGTATCAAATAGGTTTAATAATCTGTCGACATTCTCTTCACTTGAGTTAAAGCCCATTAATCCT
ATACGCCATACCTTACCTGA

Product: tRNA-adenosine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MRNIFENGNSNNDLNRGRKNLNYIKWMNSILRRSEEIGKVELPISSIILDERGRCIGRGVNRRSVNKDPLGHAEIMALRQ
ASLIKNDWRFNECITITNLEPCTMCASALIQARMGKVVFGAYDKKRGGLGGSIDLSKHKSSHHKMEIVGGILEEECSQIL
QLWFKKLRTQK

Sequences:

>Translated_171_residues
MRNIFENGNSNNDLNRGRKNLNYIKWMNSILRRSEEIGKVELPISSIILDERGRCIGRGVNRRSVNKDPLGHAEIMALRQ
ASLIKNDWRFNECITITNLEPCTMCASALIQARMGKVVFGAYDKKRGGLGGSIDLSKHKSSHHKMEIVGGILEEECSQIL
QLWFKKLRTQK
>Mature_171_residues
MRNIFENGNSNNDLNRGRKNLNYIKWMNSILRRSEEIGKVELPISSIILDERGRCIGRGVNRRSVNKDPLGHAEIMALRQ
ASLIKNDWRFNECITITNLEPCTMCASALIQARMGKVVFGAYDKKRGGLGGSIDLSKHKSSHHKMEIVGGILEEECSQIL
QLWFKKLRTQK

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=130, Percent_Identity=41.5384615384615, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 19469; Mature: 19469

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNIFENGNSNNDLNRGRKNLNYIKWMNSILRRSEEIGKVELPISSIILDERGRCIGRGV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHCCCCHHHCCC
NRRSVNKDPLGHAEIMALRQASLIKNDWRFNECITITNLEPCTMCASALIQARMGKVVFG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCHHHCC
AYDKKRGGLGGSIDLSKHKSSHHKMEIVGGILEEECSQILQLWFKKLRTQK
CCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRNIFENGNSNNDLNRGRKNLNYIKWMNSILRRSEEIGKVELPISSIILDERGRCIGRGV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHCCCCHHHCCC
NRRSVNKDPLGHAEIMALRQASLIKNDWRFNECITITNLEPCTMCASALIQARMGKVVFG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCHHHCC
AYDKKRGGLGGSIDLSKHKSSHHKMEIVGGILEEECSQILQLWFKKLRTQK
CCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]