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The map label for this gene is 78779260

Identifier: 78779260

GI number: 78779260

Start: 809099

End: 809818

Strand: Direct

Name: 78779260

Synonym: PMT9312_0876

Alternate gene names: NA

Gene position: 809099-809818 (Clockwise)

Preceding gene: 78779256

Following gene: 78779261

Centisome position: 47.34

GC content: 30.42

Gene sequence:

>720_bases
ATGACTAACAAAGAACAAGATAACTATAGTAATGCTACATTAGATTTTATTAAAACATTTGTAGATTCTAATCAAAGAAA
AAGAATAAATTTGTTAACTCAAATCGAATCTGAAGTCGAAAATATTTTTAAAATTGGACCTACATTGTTTGAAATCTTTG
ATAGTGATGGAGATGATTGGGCCGCTGGTTGGTTATTGCAAGTTTTAAAAAAATATAAACCTAATTTCTTTGAAAACACT
AAATTCAATAATTGGTTTAATACTTATTCAGATGTTGATATTAATTATGAATATTTGCAATTGATGTTAGTTGAGCAAAA
ATTTGAAGAGGCAGATAGATTAACAAGTTCTTACCTGCGACAGTTGGCAGGAAAATTAGCTGAAAAACGTGGATATGTTT
TCTACAGTGAGGTTAAGAATATGTCTGGAAAAGATCTTAAAACAATTGATAGATTATGGACTATTTATTCTACTGGAAGA
TTTGGCTTTTCAATTCAAGCAAAGATTTTAAAATCAGTAGGAATAAAGTATGAATTGTTGTGGCCTAAAATAGGCTGGAA
AAAAGAGGGTTTATGGACAAGATATCCTAAATCTTTTTGTTGGTCACTGAAGGCTCCTGATGGACATATGCCTTTAATAA
ATCAGCTAAGAGGGGTTAGACTTATGGATTCAATACTGAGGCATCCTGCTATAGCTGAGAGACATAATAATATACTTTGA

Upstream 100 bases:

>100_bases
CCTAACATCTATAAGAGGTCCTTTAAAACTTCTAAATTTCTCTAGTTCTTTTCTTTTGAAATACATGGATAGTTTTTATT
TTTAGGTTAATTTATTTAAA

Downstream 100 bases:

>100_bases
AATTGTTGTATTTAATAAGATAAAATTAAGTTAGTTTCAAAATATTATTATGTCCTTATTTCAGGGCAAAAATATTTTAA
TAAAACTTTTTAAGAGGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTNKEQDNYSNATLDFIKTFVDSNQRKRINLLTQIESEVENIFKIGPTLFEIFDSDGDDWAAGWLLQVLKKYKPNFFENT
KFNNWFNTYSDVDINYEYLQLMLVEQKFEEADRLTSSYLRQLAGKLAEKRGYVFYSEVKNMSGKDLKTIDRLWTIYSTGR
FGFSIQAKILKSVGIKYELLWPKIGWKKEGLWTRYPKSFCWSLKAPDGHMPLINQLRGVRLMDSILRHPAIAERHNNIL

Sequences:

>Translated_239_residues
MTNKEQDNYSNATLDFIKTFVDSNQRKRINLLTQIESEVENIFKIGPTLFEIFDSDGDDWAAGWLLQVLKKYKPNFFENT
KFNNWFNTYSDVDINYEYLQLMLVEQKFEEADRLTSSYLRQLAGKLAEKRGYVFYSEVKNMSGKDLKTIDRLWTIYSTGR
FGFSIQAKILKSVGIKYELLWPKIGWKKEGLWTRYPKSFCWSLKAPDGHMPLINQLRGVRLMDSILRHPAIAERHNNIL
>Mature_238_residues
TNKEQDNYSNATLDFIKTFVDSNQRKRINLLTQIESEVENIFKIGPTLFEIFDSDGDDWAAGWLLQVLKKYKPNFFENTK
FNNWFNTYSDVDINYEYLQLMLVEQKFEEADRLTSSYLRQLAGKLAEKRGYVFYSEVKNMSGKDLKTIDRLWTIYSTGRF
GFSIQAKILKSVGIKYELLWPKIGWKKEGLWTRYPKSFCWSLKAPDGHMPLINQLRGVRLMDSILRHPAIAERHNNIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016024
- InterPro:   IPR008629 [H]

Pfam domain/function: PF05419 GUN4 [H]

EC number: NA

Molecular weight: Translated: 28165; Mature: 28033

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKEQDNYSNATLDFIKTFVDSNQRKRINLLTQIESEVENIFKIGPTLFEIFDSDGDDW
CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHH
AAGWLLQVLKKYKPNFFENTKFNNWFNTYSDVDINYEYLQLMLVEQKFEEADRLTSSYLR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QLAGKLAEKRGYVFYSEVKNMSGKDLKTIDRLWTIYSTGRFGFSIQAKILKSVGIKYELL
HHHHHHHHHCCCEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEE
WPKIGWKKEGLWTRYPKSFCWSLKAPDGHMPLINQLRGVRLMDSILRHPAIAERHNNIL
CCCCCCCCCCCCHHCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCC
>Mature Secondary Structure 
TNKEQDNYSNATLDFIKTFVDSNQRKRINLLTQIESEVENIFKIGPTLFEIFDSDGDDW
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHH
AAGWLLQVLKKYKPNFFENTKFNNWFNTYSDVDINYEYLQLMLVEQKFEEADRLTSSYLR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QLAGKLAEKRGYVFYSEVKNMSGKDLKTIDRLWTIYSTGRFGFSIQAKILKSVGIKYELL
HHHHHHHHHCCCEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEE
WPKIGWKKEGLWTRYPKSFCWSLKAPDGHMPLINQLRGVRLMDSILRHPAIAERHNNIL
CCCCCCCCCCCCHHCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]