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The map label for this gene is yijE [C]

Identifier: 78779243

GI number: 78779243

Start: 794531

End: 795421

Strand: Reverse

Name: yijE [C]

Synonym: PMT9312_0859

Alternate gene names: 78779243

Gene position: 795421-794531 (Counterclockwise)

Preceding gene: 78779245

Following gene: 78779242

Centisome position: 46.54

GC content: 26.71

Gene sequence:

>891_bases
ATGATAAATATCGCAGTATTAGAAAAAAAATTTAATTCTTTGAATAAATTTAATTTGGTATTTGCTTCATTCTTCTTTAG
TTTGATGACTTTGTGCGTAAAAAATATTGATGAAAGGATACCTATTTATGAATTAGTTTTTTTCAGATCATTTATAAGTT
TAATGATTACATTATTCATAATTAATCTAAAAAATATAAATCCTTGGGGCAAAAATAGACCATTACTTATCTTAAGAGGT
GTTTTAGGAACATTAGCTTTAGTTTGTGTTTTTTATGCGATAAGAAATATGCCCCTTAGTATATCTACAGTTATTCAATA
CACATATCCCATTTTTATATCTATATTTGCTGGCATATTTATAAACGAAAAAATAACTCGGAATATAATTATTGCTTTAA
TTATTGGCTGGATTGGAATATTAGTAATAATTAATCCTAGTCAATTATCTTATATAAACGTTGAAATTGAAAATGTTTCG
ATTTCAATAGCATTTCTTGGTGCAATCTGCACTGCATTGGCTTACGTTACAGTTAAGAAACTTTCATTTACTGAAGATGT
TTATGTAATTATTGAATATTTCCCACTTGTTTCTTTTATAACTCTATTGCCAATTGTATTAATGAACTGGGTTACCCCAA
ATTGGAATGAATTAGTTTGGATAATGGGTATTGGCTTATTTACTCAATTAGGTCAGACTTTCTTAACAGTAGGTTTAAAA
AATTTACCTGCTTCTGAAGCTTCAACAATTAACTATTTGCAAGTTTTATTTGGGTCAATTTGGGGAGTTTTGTTTTTCAG
TGAAATAATTAACATTAATTTTTTATTAGGGGCCTCATTAGTTTTATTAGGAACTATTATTTCTACTACCAAAATAATCA
AAAAGACATAG

Upstream 100 bases:

>100_bases
AACCATTGAGATTATTATCAAAAAATAAATAATGATTTAATTGTTATAGTTCAAAATCAAATAAGAATCTACTTAATTTC
ACAATAAAACTATTTTAAAA

Downstream 100 bases:

>100_bases
AATATGAAAAGAATAAAAAAAACAGTGAAATTTTTCTATTTAGCTTTATTGTTTTGCTTCTCTCCTATTCCTCAAGTTAA
GGCAACAACTCCCAAGTCAG

Product: integral membrane protein, DUF6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MINIAVLEKKFNSLNKFNLVFASFFFSLMTLCVKNIDERIPIYELVFFRSFISLMITLFIINLKNINPWGKNRPLLILRG
VLGTLALVCVFYAIRNMPLSISTVIQYTYPIFISIFAGIFINEKITRNIIIALIIGWIGILVIINPSQLSYINVEIENVS
ISIAFLGAICTALAYVTVKKLSFTEDVYVIIEYFPLVSFITLLPIVLMNWVTPNWNELVWIMGIGLFTQLGQTFLTVGLK
NLPASEASTINYLQVLFGSIWGVLFFSEIININFLLGASLVLLGTIISTTKIIKKT

Sequences:

>Translated_296_residues
MINIAVLEKKFNSLNKFNLVFASFFFSLMTLCVKNIDERIPIYELVFFRSFISLMITLFIINLKNINPWGKNRPLLILRG
VLGTLALVCVFYAIRNMPLSISTVIQYTYPIFISIFAGIFINEKITRNIIIALIIGWIGILVIINPSQLSYINVEIENVS
ISIAFLGAICTALAYVTVKKLSFTEDVYVIIEYFPLVSFITLLPIVLMNWVTPNWNELVWIMGIGLFTQLGQTFLTVGLK
NLPASEASTINYLQVLFGSIWGVLFFSEIININFLLGASLVLLGTIISTTKIIKKT
>Mature_296_residues
MINIAVLEKKFNSLNKFNLVFASFFFSLMTLCVKNIDERIPIYELVFFRSFISLMITLFIINLKNINPWGKNRPLLILRG
VLGTLALVCVFYAIRNMPLSISTVIQYTYPIFISIFAGIFINEKITRNIIIALIIGWIGILVIINPSQLSYINVEIENVS
ISIAFLGAICTALAYVTVKKLSFTEDVYVIIEYFPLVSFITLLPIVLMNWVTPNWNELVWIMGIGLFTQLGQTFLTVGLK
NLPASEASTINYLQVLFGSIWGVLFFSEIININFLLGASLVLLGTIISTTKIIKKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Homo sapiens, GI23397492, Length=257, Percent_Identity=27.2373540856031, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI197927233, Length=257, Percent_Identity=27.2373540856031, Blast_Score=75, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6324991, Length=303, Percent_Identity=22.1122112211221, Blast_Score=63, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24645940, Length=288, Percent_Identity=28.8194444444444, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33403; Mature: 33403

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIAVLEKKFNSLNKFNLVFASFFFSLMTLCVKNIDERIPIYELVFFRSFISLMITLFI
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
INLKNINPWGKNRPLLILRGVLGTLALVCVFYAIRNMPLSISTVIQYTYPIFISIFAGIF
HHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
INEKITRNIIIALIIGWIGILVIINPSQLSYINVEIENVSISIAFLGAICTALAYVTVKK
HCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHH
LSFTEDVYVIIEYFPLVSFITLLPIVLMNWVTPNWNELVWIMGIGLFTQLGQTFLTVGLK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NLPASEASTINYLQVLFGSIWGVLFFSEIININFLLGASLVLLGTIISTTKIIKKT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MINIAVLEKKFNSLNKFNLVFASFFFSLMTLCVKNIDERIPIYELVFFRSFISLMITLFI
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
INLKNINPWGKNRPLLILRGVLGTLALVCVFYAIRNMPLSISTVIQYTYPIFISIFAGIF
HHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
INEKITRNIIIALIIGWIGILVIINPSQLSYINVEIENVSISIAFLGAICTALAYVTVKK
HCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHH
LSFTEDVYVIIEYFPLVSFITLLPIVLMNWVTPNWNELVWIMGIGLFTQLGQTFLTVGLK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NLPASEASTINYLQVLFGSIWGVLFFSEIININFLLGASLVLLGTIISTTKIIKKT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]