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The map label for this gene is 78778868

Identifier: 78778868

GI number: 78778868

Start: 451573

End: 452376

Strand: Direct

Name: 78778868

Synonym: PMT9312_0483

Alternate gene names: NA

Gene position: 451573-452376 (Clockwise)

Preceding gene: 78778867

Following gene: 78778871

Centisome position: 26.42

GC content: 37.31

Gene sequence:

>804_bases
ATGTCAACATCCTTTAAAAATGTCACACCGACTGGACCTGGTGGGACTGCAACCCTTTTGATTGTATTATCTTTTACTGG
CTTTCTTTTACTTACCCAATCTCTCTTTGTGGTTCCTTCTGGACAGGTTGCAGTAGTAACAACATTAGGTAAAGTAAGTG
GTCCTTCTAGGAGGGCTGGTTTAAATTTAAAACTCCCATTTATTCAGTCTGTTTATCCATTTGATATCAAAACTCAAGTT
CAACCTGAAAAATTTGAAACTTTAACTAAGGATCTACAGGTTATTAGGGCTACAGCTACTGTCAAGTATTCAGTAAAACC
TCAAGAAGCAGGAAGAATTTTTGCCACAATTGCTAGCAGAAATAGCGATGTTTATCAAAAAATAGTTCAGCCATCTTTAC
TCAAGGCCCTTAAATCAGTCTTTTCTCAATATGAGTTAGAGACAATCGCTACCGAATTTGCAGTCATCTCGGAAAAAGTA
GGAGATACCGTTGCACAAGAACTTAATTCATTCGATTATGTAGATGTTAAAAGTTTAGACTTAACAGGATTGGAGATTGC
TGAAGAATATAGAGCTGCGATTGAACAAAAGCAAATAGCGGGTCAACAATTATTAAGAGCAAAGACAGAAGTGGAAATTG
CTGAGCAAGAAGCACTCAGATATGAAACATTAAATAAAAGTCTTGATGATCAAGTACTTTTTAAACTATTTCTTGATAAG
TGGGATGGTAGTACACAAGTTGTACCTGGCTTGCCAGGTTCTGAAGGAGGCACCCCACCAGTAATTGTTGGTGGTAGAAG
GTAA

Upstream 100 bases:

>100_bases
TATGTTTCTTTGCACAATTATTAAAAAAATATTTTAATTAAATGCCTTATTAATGCACTAATTAATTAGACTAAATATGA
TTAACTAAAAGAAAAAATTA

Downstream 100 bases:

>100_bases
TTAATTTAAATTATCTCCTACCTAAAATCTAACTAGTTTGATTTTCTTTAAAAAACAAACTAGTTATTGGTTTTTTATAG
TATTAAAGCATTGATCAAAT

Product: SPFH domain-containing protein/band 7 family protein

Products: NA

Alternate protein names: SPFH Domain-Containing Protein/Band 7 Family Protein; Band 7 Family Protein; Membrane Protease Subunit; Band 7 Protein Like; Prohibitin Family Protein; SPFH Domain / Band 7 Family Protein; HflC Protein; Membrane Protease Complex Subunit; Spfh Domain Protein

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSTSFKNVTPTGPGGTATLLIVLSFTGFLLLTQSLFVVPSGQVAVVTTLGKVSGPSRRAGLNLKLPFIQSVYPFDIKTQV
QPEKFETLTKDLQVIRATATVKYSVKPQEAGRIFATIASRNSDVYQKIVQPSLLKALKSVFSQYELETIATEFAVISEKV
GDTVAQELNSFDYVDVKSLDLTGLEIAEEYRAAIEQKQIAGQQLLRAKTEVEIAEQEALRYETLNKSLDDQVLFKLFLDK
WDGSTQVVPGLPGSEGGTPPVIVGGRR

Sequences:

>Translated_267_residues
MSTSFKNVTPTGPGGTATLLIVLSFTGFLLLTQSLFVVPSGQVAVVTTLGKVSGPSRRAGLNLKLPFIQSVYPFDIKTQV
QPEKFETLTKDLQVIRATATVKYSVKPQEAGRIFATIASRNSDVYQKIVQPSLLKALKSVFSQYELETIATEFAVISEKV
GDTVAQELNSFDYVDVKSLDLTGLEIAEEYRAAIEQKQIAGQQLLRAKTEVEIAEQEALRYETLNKSLDDQVLFKLFLDK
WDGSTQVVPGLPGSEGGTPPVIVGGRR
>Mature_266_residues
STSFKNVTPTGPGGTATLLIVLSFTGFLLLTQSLFVVPSGQVAVVTTLGKVSGPSRRAGLNLKLPFIQSVYPFDIKTQVQ
PEKFETLTKDLQVIRATATVKYSVKPQEAGRIFATIASRNSDVYQKIVQPSLLKALKSVFSQYELETIATEFAVISEKVG
DTVAQELNSFDYVDVKSLDLTGLEIAEEYRAAIEQKQIAGQQLLRAKTEVEIAEQEALRYETLNKSLDDQVLFKLFLDKW
DGSTQVVPGLPGSEGGTPPVIVGGRR

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6005854, Length=227, Percent_Identity=28.6343612334802, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI221307584, Length=227, Percent_Identity=28.6343612334802, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193205005, Length=187, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321571, Length=188, Percent_Identity=27.6595744680851, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585145, Length=194, Percent_Identity=27.319587628866, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24585147, Length=194, Percent_Identity=27.319587628866, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29147; Mature: 29016

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSFKNVTPTGPGGTATLLIVLSFTGFLLLTQSLFVVPSGQVAVVTTLGKVSGPSRRAG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCHHCC
LNLKLPFIQSVYPFDIKTQVQPEKFETLTKDLQVIRATATVKYSVKPQEAGRIFATIASR
CEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECHHHHCEEEEEEECC
NSDVYQKIVQPSLLKALKSVFSQYELETIATEFAVISEKVGDTVAQELNSFDYVDVKSLD
CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
LTGLEIAEEYRAAIEQKQIAGQQLLRAKTEVEIAEQEALRYETLNKSLDDQVLFKLFLDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
WDGSTQVVPGLPGSEGGTPPVIVGGRR
CCCCCEEECCCCCCCCCCCCEEECCCC
>Mature Secondary Structure 
STSFKNVTPTGPGGTATLLIVLSFTGFLLLTQSLFVVPSGQVAVVTTLGKVSGPSRRAG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCHHCC
LNLKLPFIQSVYPFDIKTQVQPEKFETLTKDLQVIRATATVKYSVKPQEAGRIFATIASR
CEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECHHHHCEEEEEEECC
NSDVYQKIVQPSLLKALKSVFSQYELETIATEFAVISEKVGDTVAQELNSFDYVDVKSLD
CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
LTGLEIAEEYRAAIEQKQIAGQQLLRAKTEVEIAEQEALRYETLNKSLDDQVLFKLFLDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
WDGSTQVVPGLPGSEGGTPPVIVGGRR
CCCCCEEECCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA