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The map label for this gene is ybhR [C]

Identifier: 78778834

GI number: 78778834

Start: 425096

End: 425920

Strand: Direct

Name: ybhR [C]

Synonym: PMT9312_0449

Alternate gene names: 78778834

Gene position: 425096-425920 (Clockwise)

Preceding gene: 78778833

Following gene: 78778835

Centisome position: 24.87

GC content: 32.12

Gene sequence:

>825_bases
ATGGAATTAAACAAGTATAATTTATTTTTTTTATATCAAGAAACATTTGCCTTAACTAAGAGATTATTTATCCAACTAAA
AAGAAGGCCATCAACTCTTTTGGCTGGAATATTACAACCCATAATTTGGCTATTTTTATTTGGAGCCTTATTCTCTAATG
CTCCTGAAGGTTTTTTACCAGGAGTTGATTCTTATGGAAATTTTTTAGGAGCCGGACTTATTGTTTTTACTGCTTTTAGC
GGAGCCCTAAACTCTGGTCTACCTTTAATGTTTGATAGGGAGTTTGGATTTCTTAATAGATTACTTGTAGCTCCTTTAAC
CAGTAGATTATCTATAGTTTTATCCTCTTTCTTTTACATAACAATCCTGAGTTTTGTTCAGAGCATTGTAATAATGATTG
TTTCATACATTTTGGGTTATGGATGGCCAAATTTATATGGTTTAGGAATTGTGTTTACCACACTAATTCTATTAGTACTT
TTCGTGACATCAATAAGTTTAAGTTTGGCATTTGTTTTGCCTGGCCATATTGAATTAATCGCTCTAATATTTGTAATAAA
CTTACCTCTTCTTTTTGCTAGCACTGCTTTAGCTCCAATCTCTTTTATGCCAAATTGGCTGGGGTGGCTAGCTTCATTAA
ATCCATTGACTTTTGCCATTGAACCTATTAGGACTGCCTATACACAAACTATGGATTTAGAATTAGTGGCTTTACATGCC
CCATATGGTGATTTAACTTGTAAGAGTTGTATCTCAATTTTATTTTCTTTAACAGTTTGCTCCTTGATTATTATAAGACC
TCTGTTAAATAGAAAGTTAAATTAA

Upstream 100 bases:

>100_bases
AATGGCAGGTAAAAGAGACCTTAAAAAAGAATCCAAGCAATCAATGCGGTAAAAAAACTTTTGGATAACTAACTATAATG
AATACTAACTAGTGCTAATT

Downstream 100 bases:

>100_bases
AAAATTTATGCTTTTAAAAAATCATTTAATAGAAGTTTTTAAACAAGCCTCTTTAGAAAATAATTTTTTGCTTAAAGAAA
ATGTGGTTCTTAAGTGGGTC

Product: putative multidrug efflux ABC transporter

Products: NA

Alternate protein names: Multidrug Efflux ABC Transporter; ABC Transporter Permease Protein; ABC-Type Multidrug Transport System Permease Component; ABC Transporter; ABC-2 Type Transporter Superfamily; Multidrug ABC Transporter Permease Protein; ABC-Type Drug Export System Membrane Protein; ABC-2 Type Transport System Permease Protein; Daunorubicin Resistance ABC Transporter Membrane Protein; ABC-Type Multidrug Transport System ATPase Component; Multidrug ABC Transporter; Drug Exporter ABC Transporter Permease; Multidrug ABC Transporter Permease Component; ABC-2 Type Tranporter

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MELNKYNLFFLYQETFALTKRLFIQLKRRPSTLLAGILQPIIWLFLFGALFSNAPEGFLPGVDSYGNFLGAGLIVFTAFS
GALNSGLPLMFDREFGFLNRLLVAPLTSRLSIVLSSFFYITILSFVQSIVIMIVSYILGYGWPNLYGLGIVFTTLILLVL
FVTSISLSLAFVLPGHIELIALIFVINLPLLFASTALAPISFMPNWLGWLASLNPLTFAIEPIRTAYTQTMDLELVALHA
PYGDLTCKSCISILFSLTVCSLIIIRPLLNRKLN

Sequences:

>Translated_274_residues
MELNKYNLFFLYQETFALTKRLFIQLKRRPSTLLAGILQPIIWLFLFGALFSNAPEGFLPGVDSYGNFLGAGLIVFTAFS
GALNSGLPLMFDREFGFLNRLLVAPLTSRLSIVLSSFFYITILSFVQSIVIMIVSYILGYGWPNLYGLGIVFTTLILLVL
FVTSISLSLAFVLPGHIELIALIFVINLPLLFASTALAPISFMPNWLGWLASLNPLTFAIEPIRTAYTQTMDLELVALHA
PYGDLTCKSCISILFSLTVCSLIIIRPLLNRKLN
>Mature_274_residues
MELNKYNLFFLYQETFALTKRLFIQLKRRPSTLLAGILQPIIWLFLFGALFSNAPEGFLPGVDSYGNFLGAGLIVFTAFS
GALNSGLPLMFDREFGFLNRLLVAPLTSRLSIVLSSFFYITILSFVQSIVIMIVSYILGYGWPNLYGLGIVFTTLILLVL
FVTSISLSLAFVLPGHIELIALIFVINLPLLFASTALAPISFMPNWLGWLASLNPLTFAIEPIRTAYTQTMDLELVALHA
PYGDLTCKSCISILFSLTVCSLIIIRPLLNRKLN

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30478; Mature: 30478

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELNKYNLFFLYQETFALTKRLFIQLKRRPSTLLAGILQPIIWLFLFGALFSNAPEGFLP
CCCCCEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GVDSYGNFLGAGLIVFTAFSGALNSGLPLMFDREFGFLNRLLVAPLTSRLSIVLSSFFYI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
TILSFVQSIVIMIVSYILGYGWPNLYGLGIVFTTLILLVLFVTSISLSLAFVLPGHIELI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ALIFVINLPLLFASTALAPISFMPNWLGWLASLNPLTFAIEPIRTAYTQTMDLELVALHA
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEEEEEC
PYGDLTCKSCISILFSLTVCSLIIIRPLLNRKLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MELNKYNLFFLYQETFALTKRLFIQLKRRPSTLLAGILQPIIWLFLFGALFSNAPEGFLP
CCCCCEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GVDSYGNFLGAGLIVFTAFSGALNSGLPLMFDREFGFLNRLLVAPLTSRLSIVLSSFFYI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
TILSFVQSIVIMIVSYILGYGWPNLYGLGIVFTTLILLVLFVTSISLSLAFVLPGHIELI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ALIFVINLPLLFASTALAPISFMPNWLGWLASLNPLTFAIEPIRTAYTQTMDLELVALHA
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEEEEEC
PYGDLTCKSCISILFSLTVCSLIIIRPLLNRKLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA