| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778805
Identifier: 78778805
GI number: 78778805
Start: 398023
End: 398415
Strand: Direct
Name: 78778805
Synonym: PMT9312_0420
Alternate gene names: NA
Gene position: 398023-398415 (Clockwise)
Preceding gene: 78778804
Following gene: 78778806
Centisome position: 23.29
GC content: 30.79
Gene sequence:
>393_bases ATGAAAAATAAATTAACCTTTTTATTCGATGGTGGATGTCCACTTTGTTTGAGAGAAACGAATTTTTTAAAAAAAAGAGA TATCTTAAATCAAATTTCATTTATAGATATTAATAGTAAAGATTATGACCAAAGCCTATTTAATGACATCTCATATTCAG AAGCCATGTCAAACCTGCATGGGATTATGGAAAATGGTGCAATTATTAGGGGACTAGACGTACTTGCATATTCTTATGAA TTAGTTGGTTTAGGCTGGGTTTATTATCCTTTGAAGATTAAATTCTTATCTCCCATGTTAAGGCTGGTTTACAGATATTG GGCAAAATATAGACTTCAAATTACGGGTCGATCCGATATTGAAAAAATTTGTACCTCTCAATGTGAACAATAA
Upstream 100 bases:
>100_bases AAGGCTTTATAAAGCTTGTACTTTTAAAAGTTTCTTCGCAGTAGATAATTTTTTTTAATCCCACAGAAAAGTTATTTAAA CTCTATATTTGTATAAAAAT
Downstream 100 bases:
>100_bases ATATGGACAATATCGACATAGACAGAATAATAGAAATGTGTTGGGAAGATAGAACACCCTTTGAAGCTATTGAGTATCAA TTTGGTTTAAAAGAGGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MKNKLTFLFDGGCPLCLRETNFLKKRDILNQISFIDINSKDYDQSLFNDISYSEAMSNLHGIMENGAIIRGLDVLAYSYE LVGLGWVYYPLKIKFLSPMLRLVYRYWAKYRLQITGRSDIEKICTSQCEQ
Sequences:
>Translated_130_residues MKNKLTFLFDGGCPLCLRETNFLKKRDILNQISFIDINSKDYDQSLFNDISYSEAMSNLHGIMENGAIIRGLDVLAYSYE LVGLGWVYYPLKIKFLSPMLRLVYRYWAKYRLQITGRSDIEKICTSQCEQ >Mature_130_residues MKNKLTFLFDGGCPLCLRETNFLKKRDILNQISFIDINSKDYDQSLFNDISYSEAMSNLHGIMENGAIIRGLDVLAYSYE LVGLGWVYYPLKIKFLSPMLRLVYRYWAKYRLQITGRSDIEKICTSQCEQ
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15184; Mature: 15184
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKLTFLFDGGCPLCLRETNFLKKRDILNQISFIDINSKDYDQSLFNDISYSEAMSNLH CCCCEEEEECCCCCEEECCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCHHHHHHHHH GIMENGAIIRGLDVLAYSYELVGLGWVYYPLKIKFLSPMLRLVYRYWAKYRLQITGRSDI HHHHCCCEEEHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCHHH EKICTSQCEQ HHHHHHHCCC >Mature Secondary Structure MKNKLTFLFDGGCPLCLRETNFLKKRDILNQISFIDINSKDYDQSLFNDISYSEAMSNLH CCCCEEEEECCCCCEEECCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCHHHHHHHHH GIMENGAIIRGLDVLAYSYELVGLGWVYYPLKIKFLSPMLRLVYRYWAKYRLQITGRSDI HHHHCCCEEEHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCHHH EKICTSQCEQ HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA