| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778760
Identifier: 78778760
GI number: 78778760
Start: 354755
End: 356677
Strand: Direct
Name: 78778760
Synonym: PMT9312_0375
Alternate gene names: NA
Gene position: 354755-356677 (Clockwise)
Preceding gene: 78778759
Following gene: 78778761
Centisome position: 20.76
GC content: 32.4
Gene sequence:
>1923_bases ATGATTTCAATAAATATTCATAGCGAACCATTCAGAAGAGACGGCAATATATCAGCTGAAGGTGCATCAAAATTATTAGG TAGGCCTTCTCTTAGTCCTTTAGAATTGCTTTTGAGAGAGACTCTTCAGAATAGTTGGGATGCTTCAATAGGTGAAAAGA ATGCCGTACCATCATTTAAAATCAGAGTTAGAAATTTGAATGAAACAGAAAAATTAAAGTTTCAGAGTTTCTTTTCAGAA TTGCCGCCTGATGAGGCAAATGAGAGTGTTAATAAAGGTTTGAAAAGGTTTTTTAATAAACCAAATCAAATAGTTTTAGA GATATGTGATTTTGGTACAAGAGGCCTTGGAGGTCCCTTCTCCGCTTCTGAGTCTTTGAGCGATCTTGAAAGTAATGACT TTGTAAATTTTGTAAAAAATATTGGTAGTCCCCGAGATATTCAATTGGGTGGAGGGACTTATGGATTTGGTAAATCTTCC CTTTTCAAGATGAGTAAATGTAATACTGTTTTAATTGAAACTTTAACAAGAAACAAAAATAAAATTCAAAATAGAATGAT TGGATATGCTTTAGGTTCCGAATTTAATTATAAAGGTAAAAGATTCACAGGAAGGCATTGGTGGGGGACTAAAAGTGAGT CTCTAGAAGAACCAAATTCAGTTGATCCTTTAATTGAAGATGAAGCCAAAATCTATGCCAAAGAAATGGGATTAATGACA AGACTTAATAGTAGTAGGACCGGTACATCACTTATTATTCTTGATCCTAATTTAGAAGATTTAGAAGATAATAATGAAGA AAATCAACTTGCCTTAGAGAGGCCTGAAGATAATGATCTTCTCTGCAAAAAATTAATGATAAGAATACAAGAAATTCTTT TATGGCATGCATGGCCAAAATTCACACCCAATGAAGATGAAAATGTTCCAATGAAATGCACAATATCAATTTTTGGAAAT ACCAAAAATCTTCCCGATCCAAGATATATATCTCCATTTAATTTGTTAACTGCTTCTCTAAATAAAGCTAGGAAAAAAGA GGATGAGATATTTTCACAGAGGCCCAAAAAATTACTTGGTTATGTAGGTGTTCAAAAATTTTCATATGAATCAGAAGCTG ATCAAAGATTTAGAAAGTTACTGGGAGAAGAGTCTTTGATTCCAGATAAACTTTCTCACTTTGCTTTATTAAGACCAGCT GAACTAGTAGTCAAATATATTAGTAGAACTTTAGAGGAAGGCCAGCCGCAATGGGGTGGGGTCTTTATTTGTAATAATGA TTCTGAAATTGAACAGTCTTTTGCTAGGTCTGAGCCTCCCTCTCACGATGACTGGAATCCACAATCACTTGAAAATAATT ATCAAAGAACTTACGTTAATCAAGCACTTACAAAAATAAAAGAAAAAATAAAAATATTATCTGGAATTAACTCTATTGAA AACCAAGAGGAAAATGATTCCTTATTTGAAGGAGATTCATTAGCAAAATTAGCAGGAGATATTGGCAGGTCCCTAATCGG AAAAGGTTTTGGTGGTTCAGATGGATCAAAAGAAAGAACACAATCTTCTGGCTCTTCTAAACCAAAAATTTCTCGCTTAA CAAAGCCTATTGCTTTAGGTACAAAATTAGTAGATGAAAAATTAATAGCAGATTTCTCTATGCAACTTTCAACCAAAAAA GATAACGTGGTTGATATTAATTTAAAGTCATTTGTAAAGACCGATGATGGTAAGGAATTTTTTGCACCTAATGGGAAATC TCCAAAAATCACAAAAGTTTTAGTTAATAATAAAGAAGAATTTTTGGAAGAAGATAAATTAACTTTCAAACAGGATTCTG ATAATTCAGATATAAGAGTTTCTGTAGAAATACCTGATTACGTTGCGGTTTATTTGAATGCTGAATTATTAAATAATGAG TAA
Upstream 100 bases:
>100_bases ATTTCAAAAATAAGATATGAAATTGATTTAAATAAAGTATCAAATTTTAAGATTGAAAATGAAGAAGTTTTTAAAATGAT TTCTAAGAGTTGAGGGGAAT
Downstream 100 bases:
>100_bases AATATAATGAAAAATATAGCTTTCCCATATCCAACTTTATTTCCATTTATTGCTAAAGAATCAAAATGGCAATCTTTAAT AAATTTGGAATCTCCTAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MISINIHSEPFRRDGNISAEGASKLLGRPSLSPLELLLRETLQNSWDASIGEKNAVPSFKIRVRNLNETEKLKFQSFFSE LPPDEANESVNKGLKRFFNKPNQIVLEICDFGTRGLGGPFSASESLSDLESNDFVNFVKNIGSPRDIQLGGGTYGFGKSS LFKMSKCNTVLIETLTRNKNKIQNRMIGYALGSEFNYKGKRFTGRHWWGTKSESLEEPNSVDPLIEDEAKIYAKEMGLMT RLNSSRTGTSLIILDPNLEDLEDNNEENQLALERPEDNDLLCKKLMIRIQEILLWHAWPKFTPNEDENVPMKCTISIFGN TKNLPDPRYISPFNLLTASLNKARKKEDEIFSQRPKKLLGYVGVQKFSYESEADQRFRKLLGEESLIPDKLSHFALLRPA ELVVKYISRTLEEGQPQWGGVFICNNDSEIEQSFARSEPPSHDDWNPQSLENNYQRTYVNQALTKIKEKIKILSGINSIE NQEENDSLFEGDSLAKLAGDIGRSLIGKGFGGSDGSKERTQSSGSSKPKISRLTKPIALGTKLVDEKLIADFSMQLSTKK DNVVDINLKSFVKTDDGKEFFAPNGKSPKITKVLVNNKEEFLEEDKLTFKQDSDNSDIRVSVEIPDYVAVYLNAELLNNE
Sequences:
>Translated_640_residues MISINIHSEPFRRDGNISAEGASKLLGRPSLSPLELLLRETLQNSWDASIGEKNAVPSFKIRVRNLNETEKLKFQSFFSE LPPDEANESVNKGLKRFFNKPNQIVLEICDFGTRGLGGPFSASESLSDLESNDFVNFVKNIGSPRDIQLGGGTYGFGKSS LFKMSKCNTVLIETLTRNKNKIQNRMIGYALGSEFNYKGKRFTGRHWWGTKSESLEEPNSVDPLIEDEAKIYAKEMGLMT RLNSSRTGTSLIILDPNLEDLEDNNEENQLALERPEDNDLLCKKLMIRIQEILLWHAWPKFTPNEDENVPMKCTISIFGN TKNLPDPRYISPFNLLTASLNKARKKEDEIFSQRPKKLLGYVGVQKFSYESEADQRFRKLLGEESLIPDKLSHFALLRPA ELVVKYISRTLEEGQPQWGGVFICNNDSEIEQSFARSEPPSHDDWNPQSLENNYQRTYVNQALTKIKEKIKILSGINSIE NQEENDSLFEGDSLAKLAGDIGRSLIGKGFGGSDGSKERTQSSGSSKPKISRLTKPIALGTKLVDEKLIADFSMQLSTKK DNVVDINLKSFVKTDDGKEFFAPNGKSPKITKVLVNNKEEFLEEDKLTFKQDSDNSDIRVSVEIPDYVAVYLNAELLNNE >Mature_640_residues MISINIHSEPFRRDGNISAEGASKLLGRPSLSPLELLLRETLQNSWDASIGEKNAVPSFKIRVRNLNETEKLKFQSFFSE LPPDEANESVNKGLKRFFNKPNQIVLEICDFGTRGLGGPFSASESLSDLESNDFVNFVKNIGSPRDIQLGGGTYGFGKSS LFKMSKCNTVLIETLTRNKNKIQNRMIGYALGSEFNYKGKRFTGRHWWGTKSESLEEPNSVDPLIEDEAKIYAKEMGLMT RLNSSRTGTSLIILDPNLEDLEDNNEENQLALERPEDNDLLCKKLMIRIQEILLWHAWPKFTPNEDENVPMKCTISIFGN TKNLPDPRYISPFNLLTASLNKARKKEDEIFSQRPKKLLGYVGVQKFSYESEADQRFRKLLGEESLIPDKLSHFALLRPA ELVVKYISRTLEEGQPQWGGVFICNNDSEIEQSFARSEPPSHDDWNPQSLENNYQRTYVNQALTKIKEKIKILSGINSIE NQEENDSLFEGDSLAKLAGDIGRSLIGKGFGGSDGSKERTQSSGSSKPKISRLTKPIALGTKLVDEKLIADFSMQLSTKK DNVVDINLKSFVKTDDGKEFFAPNGKSPKITKVLVNNKEEFLEEDKLTFKQDSDNSDIRVSVEIPDYVAVYLNAELLNNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72168; Mature: 72168
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISINIHSEPFRRDGNISAEGASKLLGRPSLSPLELLLRETLQNSWDASIGEKNAVPSFK CEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEE IRVRNLNETEKLKFQSFFSELPPDEANESVNKGLKRFFNKPNQIVLEICDFGTRGLGGPF EEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCCCC SASESLSDLESNDFVNFVKNIGSPRDIQLGGGTYGFGKSSLFKMSKCNTVLIETLTRNKN CCHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHCCHH KIQNRMIGYALGSEFNYKGKRFTGRHWWGTKSESLEEPNSVDPLIEDEAKIYAKEMGLMT HHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RLNSSRTGTSLIILDPNLEDLEDNNEENQLALERPEDNDLLCKKLMIRIQEILLWHAWPK HCCCCCCCCEEEEECCCCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC FTPNEDENVPMKCTISIFGNTKNLPDPRYISPFNLLTASLNKARKKEDEIFSQRPKKLLG CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHH YVGVQKFSYESEADQRFRKLLGEESLIPDKLSHFALLRPAELVVKYISRTLEEGQPQWGG HHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCE VFICNNDSEIEQSFARSEPPSHDDWNPQSLENNYQRTYVNQALTKIKEKIKILSGINSIE EEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NQEENDSLFEGDSLAKLAGDIGRSLIGKGFGGSDGSKERTQSSGSSKPKISRLTKPIALG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHH TKLVDEKLIADFSMQLSTKKDNVVDINLKSFVKTDDGKEFFAPNGKSPKITKVLVNNKEE HHHHHHHHHHHHHHEEECCCCCEEEEEHHHHEECCCCCEECCCCCCCCCEEEEEECCHHH FLEEDKLTFKQDSDNSDIRVSVEIPDYVAVYLNAELLNNE HHHHHCCEEECCCCCCCEEEEEECCCEEEEEEEHHHHCCC >Mature Secondary Structure MISINIHSEPFRRDGNISAEGASKLLGRPSLSPLELLLRETLQNSWDASIGEKNAVPSFK CEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEE IRVRNLNETEKLKFQSFFSELPPDEANESVNKGLKRFFNKPNQIVLEICDFGTRGLGGPF EEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCCCC SASESLSDLESNDFVNFVKNIGSPRDIQLGGGTYGFGKSSLFKMSKCNTVLIETLTRNKN CCHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHCCHH KIQNRMIGYALGSEFNYKGKRFTGRHWWGTKSESLEEPNSVDPLIEDEAKIYAKEMGLMT HHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RLNSSRTGTSLIILDPNLEDLEDNNEENQLALERPEDNDLLCKKLMIRIQEILLWHAWPK HCCCCCCCCEEEEECCCCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC FTPNEDENVPMKCTISIFGNTKNLPDPRYISPFNLLTASLNKARKKEDEIFSQRPKKLLG CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHH YVGVQKFSYESEADQRFRKLLGEESLIPDKLSHFALLRPAELVVKYISRTLEEGQPQWGG HHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCE VFICNNDSEIEQSFARSEPPSHDDWNPQSLENNYQRTYVNQALTKIKEKIKILSGINSIE EEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NQEENDSLFEGDSLAKLAGDIGRSLIGKGFGGSDGSKERTQSSGSSKPKISRLTKPIALG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHH TKLVDEKLIADFSMQLSTKKDNVVDINLKSFVKTDDGKEFFAPNGKSPKITKVLVNNKEE HHHHHHHHHHHHHHEEECCCCCEEEEEHHHHEECCCCCEECCCCCCCCCEEEEEECCHHH FLEEDKLTFKQDSDNSDIRVSVEIPDYVAVYLNAELLNNE HHHHHCCEEECCCCCCCEEEEEECCCEEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA