Click here to switch to the map view.

The map label for this gene is 78778755

Identifier: 78778755

GI number: 78778755

Start: 349115

End: 349897

Strand: Direct

Name: 78778755

Synonym: PMT9312_0370

Alternate gene names: NA

Gene position: 349115-349897 (Clockwise)

Preceding gene: 78778753

Following gene: 78778757

Centisome position: 20.43

GC content: 42.02

Gene sequence:

>783_bases
ATGAAAATTATTAATAGACTCAGGTCGCTGCCAGGCGATTCTCTGGGCGTTATACGCCGCACTCCGCCACTTGTTTTCGC
AATGGCTGTCTTATCTCTTGGAGGATTTATAGGCGCCTCCACGGTCCTTGTGAGAGGGTTCAGAACGGTTGAGAATACTA
TCACTGTTACCGGTGCAAGTACTGAAAGTTTTGAGAGTGATATTGCAAAATGGTCAGTACAGGTAAAGACCTCAGGTAAA
ACCCAGATTGACTCATTTACCAAGCATAAACAGTCCATTAATAAGACAATGGAATTCCTTAAAGCCAATGGAATTGATGA
TGGTGTAAAGCAGGATGTTTATCTTGGACCTGCGAGTATCAGTGAATATAAAACAAGGAATCCCAAGACTAATGAAATCA
TTAGAACTGAATGGATTACTTATCAGAATATTGAGATTGAAAGTAGGGATGTTTATAACATCCAGAAGACTCACAGTCAG
ATAACAGAATTGCTTGGTAAAGGTTTAAGGGTTAAACCGAGCCGCCCTGAATTCACCTATTCAAAACTGGCTGATAAACG
CGTTGACATGCTTGCTAAGGCAGCAAAGGATGCAAGAGTTAGGGCTGAAGCTATTGCTCTTCAGGCAGGCTCTGAAGTAG
GTGGTTTAAAGAGAGTGAACACCGGTGTTTTTCAGATAACAGTTCCGAATTCCACGAAGGTAAGCAGCTGGGGTTCTTAT
GACACTTCAACTATCAAGAAAGACATCACTGCAGTTATGGGAGTGACTTTCGCTGTTAAGTGA

Upstream 100 bases:

>100_bases
AATGGCCAGATAGAACTGAAGGAATAAAAGTCAGGGATTTTTATAATATTTTTCTTTCGGTTCAGCTGTTAAAAAGCTCC
TACACACATACTGATAAACA

Downstream 100 bases:

>100_bases
TGACTTAGGGAGTCTTCTTTTTGCCTTTAAGAATCATCAGCAAAGGCAGACCAATAAGCATCAGACTCCCATCAATTAAT
AAAAAAGTATTCAGATTCAT

Product: putative periplasmic protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKIINRLRSLPGDSLGVIRRTPPLVFAMAVLSLGGFIGASTVLVRGFRTVENTITVTGASTESFESDIAKWSVQVKTSGK
TQIDSFTKHKQSINKTMEFLKANGIDDGVKQDVYLGPASISEYKTRNPKTNEIIRTEWITYQNIEIESRDVYNIQKTHSQ
ITELLGKGLRVKPSRPEFTYSKLADKRVDMLAKAAKDARVRAEAIALQAGSEVGGLKRVNTGVFQITVPNSTKVSSWGSY
DTSTIKKDITAVMGVTFAVK

Sequences:

>Translated_260_residues
MKIINRLRSLPGDSLGVIRRTPPLVFAMAVLSLGGFIGASTVLVRGFRTVENTITVTGASTESFESDIAKWSVQVKTSGK
TQIDSFTKHKQSINKTMEFLKANGIDDGVKQDVYLGPASISEYKTRNPKTNEIIRTEWITYQNIEIESRDVYNIQKTHSQ
ITELLGKGLRVKPSRPEFTYSKLADKRVDMLAKAAKDARVRAEAIALQAGSEVGGLKRVNTGVFQITVPNSTKVSSWGSY
DTSTIKKDITAVMGVTFAVK
>Mature_260_residues
MKIINRLRSLPGDSLGVIRRTPPLVFAMAVLSLGGFIGASTVLVRGFRTVENTITVTGASTESFESDIAKWSVQVKTSGK
TQIDSFTKHKQSINKTMEFLKANGIDDGVKQDVYLGPASISEYKTRNPKTNEIIRTEWITYQNIEIESRDVYNIQKTHSQ
ITELLGKGLRVKPSRPEFTYSKLADKRVDMLAKAAKDARVRAEAIALQAGSEVGGLKRVNTGVFQITVPNSTKVSSWGSY
DTSTIKKDITAVMGVTFAVK

Specific function: Unknown

COG id: COG2859

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28593; Mature: 28593

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIINRLRSLPGDSLGVIRRTPPLVFAMAVLSLGGFIGASTVLVRGFRTVENTITVTGAS
CHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
TESFESDIAKWSVQVKTSGKTQIDSFTKHKQSINKTMEFLKANGIDDGVKQDVYLGPASI
HHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCH
SEYKTRNPKTNEIIRTEWITYQNIEIESRDVYNIQKTHSQITELLGKGLRVKPSRPEFTY
HHHHCCCCCCCCEEEEEEEEEECEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
SKLADKRVDMLAKAAKDARVRAEAIALQAGSEVGGLKRVNTGVFQITVPNSTKVSSWGSY
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCEEEEECCCCCCCCCCCCC
DTSTIKKDITAVMGVTFAVK
CHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MKIINRLRSLPGDSLGVIRRTPPLVFAMAVLSLGGFIGASTVLVRGFRTVENTITVTGAS
CHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
TESFESDIAKWSVQVKTSGKTQIDSFTKHKQSINKTMEFLKANGIDDGVKQDVYLGPASI
HHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCH
SEYKTRNPKTNEIIRTEWITYQNIEIESRDVYNIQKTHSQITELLGKGLRVKPSRPEFTY
HHHHCCCCCCCCEEEEEEEEEECEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
SKLADKRVDMLAKAAKDARVRAEAIALQAGSEVGGLKRVNTGVFQITVPNSTKVSSWGSY
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCEEEEECCCCCCCCCCCCC
DTSTIKKDITAVMGVTFAVK
CHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA