Click here to switch to the map view.

The map label for this gene is 78778744

Identifier: 78778744

GI number: 78778744

Start: 338972

End: 339832

Strand: Reverse

Name: 78778744

Synonym: PMT9312_0359

Alternate gene names: NA

Gene position: 339832-338972 (Counterclockwise)

Preceding gene: 78778748

Following gene: 78778741

Centisome position: 19.88

GC content: 26.25

Gene sequence:

>861_bases
ATGAAAAATTTAATAATATTAACCAAAAGTTTTTTTCTTTTAAAACCAAGATTTTTATCAACTATATTTTTTGTTCCAAT
TCTTTATGGTATTGGCTGGGCTTTATCTCAGCCATTATTATTTTTGAATTTTGAGAAAGAAAATATATCCTTAGTTGGTA
CTATTTTTACTTTTCTAATTTTTATCTTTTTACTCCCATATTGGTTTCATATCAAAAGGAACATATCAAGTGCATGGGTT
CTCCTTGGGATAACCAAACAAAATTTTTTCAAAAACTTTATCAATTTTTCTCAAGGTATTTTATTTGCCTTAGTTTTAAT
AATTCTAATTCTGGTACCACTATTGCAAAAAAATTATATTTCTTGGATAGGTGAATTCTCGCCAATCATATTATTAAATT
CTATTTTACTTGGATTAGGTGTTGGATTCGCAGAGGAAATAATTTTTAGAGGCTGGTTACTAGAAGAATTTAAATTTGAA
TATGGTACAAAAATATCAATAGCTTTACAAGCTATAGTTTTTAGTTTCGTTCATAATTTATCAAATGAGATCTTTTGGAA
CATAATTGGATTACGTTTAGGATTTATTTTACTTGGGATATTTCTATCATTAGTAAGAATTAGAGATAAAGGTTCTTTAT
GGAATTGCATAGGAATTCATGGTGGACTTGTTGGTATTTGGTTCTTTATAAACAACGGATTAATAGAATTCAAAGAAAAT
ACACCTTCTTTTTTAGCAGGGCCTTTTATACAAAATATTCCAAACCCAATAGGAAGCTTTAGTGCAATATTAGTATTACT
TTTGTTATGTATTTTTTATGCAATAAAATCAAAAAAGTTTTCTTCTAAAACTTTTAATTAG

Upstream 100 bases:

>100_bases
CAAAAAACATAAATTATAGTAAAAAGAAAAAGTCAAATCTTTTTGAAAAAGTAGTTAGAATAATAGCCAAAGTGTTGGTG
TAATTTATATTCAAACTAAA

Downstream 100 bases:

>100_bases
ATATAAATACCGATTGATTTTTGATTAATAATTGTCAGATTAAAATAAAGCTTAATACTCATATGAACTTTGAGGCAGGA
ATAAGATTTATTTTCTTTTT

Product: abortive infection protein

Products: NA

Alternate protein names: Metal-Dependent Membrane Protease; CAAX Amino Terminal Protease Family Protein; Caax Amino Protease Family Protein; CAAX Amino Protease

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKNLIILTKSFFLLKPRFLSTIFFVPILYGIGWALSQPLLFLNFEKENISLVGTIFTFLIFIFLLPYWFHIKRNISSAWV
LLGITKQNFFKNFINFSQGILFALVLIILILVPLLQKNYISWIGEFSPIILLNSILLGLGVGFAEEIIFRGWLLEEFKFE
YGTKISIALQAIVFSFVHNLSNEIFWNIIGLRLGFILLGIFLSLVRIRDKGSLWNCIGIHGGLVGIWFFINNGLIEFKEN
TPSFLAGPFIQNIPNPIGSFSAILVLLLLCIFYAIKSKKFSSKTFN

Sequences:

>Translated_286_residues
MKNLIILTKSFFLLKPRFLSTIFFVPILYGIGWALSQPLLFLNFEKENISLVGTIFTFLIFIFLLPYWFHIKRNISSAWV
LLGITKQNFFKNFINFSQGILFALVLIILILVPLLQKNYISWIGEFSPIILLNSILLGLGVGFAEEIIFRGWLLEEFKFE
YGTKISIALQAIVFSFVHNLSNEIFWNIIGLRLGFILLGIFLSLVRIRDKGSLWNCIGIHGGLVGIWFFINNGLIEFKEN
TPSFLAGPFIQNIPNPIGSFSAILVLLLLCIFYAIKSKKFSSKTFN
>Mature_286_residues
MKNLIILTKSFFLLKPRFLSTIFFVPILYGIGWALSQPLLFLNFEKENISLVGTIFTFLIFIFLLPYWFHIKRNISSAWV
LLGITKQNFFKNFINFSQGILFALVLIILILVPLLQKNYISWIGEFSPIILLNSILLGLGVGFAEEIIFRGWLLEEFKFE
YGTKISIALQAIVFSFVHNLSNEIFWNIIGLRLGFILLGIFLSLVRIRDKGSLWNCIGIHGGLVGIWFFINNGLIEFKEN
TPSFLAGPFIQNIPNPIGSFSAILVLLLLCIFYAIKSKKFSSKTFN

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32723; Mature: 32723

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLIILTKSFFLLKPRFLSTIFFVPILYGIGWALSQPLLFLNFEKENISLVGTIFTFLI
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH
FIFLLPYWFHIKRNISSAWVLLGITKQNFFKNFINFSQGILFALVLIILILVPLLQKNYI
HHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWIGEFSPIILLNSILLGLGVGFAEEIIFRGWLLEEFKFEYGTKISIALQAIVFSFVHNL
HHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SNEIFWNIIGLRLGFILLGIFLSLVRIRDKGSLWNCIGIHGGLVGIWFFINNGLIEFKEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCHHHHHHHHHHCCEEEECCC
TPSFLAGPFIQNIPNPIGSFSAILVLLLLCIFYAIKSKKFSSKTFN
CCCHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKNLIILTKSFFLLKPRFLSTIFFVPILYGIGWALSQPLLFLNFEKENISLVGTIFTFLI
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH
FIFLLPYWFHIKRNISSAWVLLGITKQNFFKNFINFSQGILFALVLIILILVPLLQKNYI
HHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWIGEFSPIILLNSILLGLGVGFAEEIIFRGWLLEEFKFEYGTKISIALQAIVFSFVHNL
HHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SNEIFWNIIGLRLGFILLGIFLSLVRIRDKGSLWNCIGIHGGLVGIWFFINNGLIEFKEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCHHHHHHHHHHCCEEEECCC
TPSFLAGPFIQNIPNPIGSFSAILVLLLLCIFYAIKSKKFSSKTFN
CCCHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA