| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778732
Identifier: 78778732
GI number: 78778732
Start: 333812
End: 334027
Strand: Reverse
Name: 78778732
Synonym: PMT9312_0347
Alternate gene names: NA
Gene position: 334027-333812 (Counterclockwise)
Preceding gene: 78778734
Following gene: 78778730
Centisome position: 19.54
GC content: 34.26
Gene sequence:
>216_bases ATGAGTTTTTCTGAAATAAGAAAATTTTTAATTAAGATGCAGTCCGATGAAGACTTAAAGCAGCTTGTTACATCATCCTC TACAGCTGATGATGTGGCACTAATAGGTCAACGCTTAGGATATGATTTTTCAGGAGATGATCTGTTAAGATTTAATGGAC AGAAAGTTGATAAAGTAACCGTAAGAAAAGTAGATCATCCAGGGGAATATCACTAA
Upstream 100 bases:
>100_bases GTAAGTCATAAAAATAGTATAATAATTATCTATTTATCTTGTTCTAAATAAGAACAAGATTTTTATAAGTTATTTAAAAT CAATCAATTAAATTCTAGTG
Downstream 100 bases:
>100_bases TTTAAGACTTAACCCATATTGCAAGCCCTCCGCCCCTGCCTCTTGCACACATCCATTTTTCTTTAGTGCTAAGTGCTATA AGTGAGAAAAAAGGCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSFSEIRKFLIKMQSDEDLKQLVTSSSTADDVALIGQRLGYDFSGDDLLRFNGQKVDKVTVRKVDHPGEYH
Sequences:
>Translated_71_residues MSFSEIRKFLIKMQSDEDLKQLVTSSSTADDVALIGQRLGYDFSGDDLLRFNGQKVDKVTVRKVDHPGEYH >Mature_70_residues SFSEIRKFLIKMQSDEDLKQLVTSSSTADDVALIGQRLGYDFSGDDLLRFNGQKVDKVTVRKVDHPGEYH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8077; Mature: 7946
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSEIRKFLIKMQSDEDLKQLVTSSSTADDVALIGQRLGYDFSGDDLLRFNGQKVDKVT CCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCEE VRKVDHPGEYH EEECCCCCCCC >Mature Secondary Structure SFSEIRKFLIKMQSDEDLKQLVTSSSTADDVALIGQRLGYDFSGDDLLRFNGQKVDKVT CHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCEE VRKVDHPGEYH EEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA