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The map label for this gene is 78484579

Identifier: 78484579

GI number: 78484579

Start: 279271

End: 279873

Strand: Reverse

Name: 78484579

Synonym: Tcr_0234

Alternate gene names: NA

Gene position: 279873-279271 (Counterclockwise)

Preceding gene: 78484580

Following gene: 78484578

Centisome position: 11.53

GC content: 46.6

Gene sequence:

>603_bases
ATGAAGAGCATTAAAAACATTAACGTTTTTTTAAAAGGAGACATTATGGTCAGCTTAACCACCCCCATCTGTGATTTCGG
CCAACCCGCCATCGAGTTTGATTTACCCGGTGTGGACGGGCAAAACTGGACTTTGGAAAAAGCTAAAGGCCCTAATGGGT
TATTGGTGATGTTCATCTGCAACCACTGCCCGTATGTCAAAGCCATTCAAGAACGCCTGGCGAACGATGCCCGCATTCTT
CGTGACAACTATGGCGTTAACAGCATTGCCATCATGTCGAACGACCCAAGTGAATATGAAGAAGACTCGTTTGAAAACAT
GAAAAAAGTCGCCGAAACCTACGTTTTTCCATTCCCTTACGTGATGGATGAAATGCAAGAAGTCGCCAAAGCCTATGGCG
CCGTCTGTACTCCAGACTTTTTTGGCTACAACGCCGACTTAAAACTGCAATACCGAGGCCGACTTGACGCCTCTCGTAAA
GAAACCGCACCGGAAGATGTGCGCCGCGATTTATTAGAAGCCATGAAACAAGTCGCCGAAACCGGATACGGTCCCAAAGA
ACAGATTCCCTCCATGGGCTGTTCCATTAAATGGTCTGAATAA

Upstream 100 bases:

>100_bases
TAGAATCACCTTGAAATAGAATCACCTTAAAACGTCCCAATTAAGAACATCTCTAACTGATTAAAAAAGCCGCTTTTATG
CGGCTTTTTTATTGCCTATA

Downstream 100 bases:

>100_bases
GAAGCCAAATACTTTTCTCTAAAGCCAATGAACTGTTCCATTATGCGCTCACTTACACTGGAACAGTTTATCCCTTTTTT
ATTTCCTGCCTATCTAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKSIKNINVFLKGDIMVSLTTPICDFGQPAIEFDLPGVDGQNWTLEKAKGPNGLLVMFICNHCPYVKAIQERLANDARIL
RDNYGVNSIAIMSNDPSEYEEDSFENMKKVAETYVFPFPYVMDEMQEVAKAYGAVCTPDFFGYNADLKLQYRGRLDASRK
ETAPEDVRRDLLEAMKQVAETGYGPKEQIPSMGCSIKWSE

Sequences:

>Translated_200_residues
MKSIKNINVFLKGDIMVSLTTPICDFGQPAIEFDLPGVDGQNWTLEKAKGPNGLLVMFICNHCPYVKAIQERLANDARIL
RDNYGVNSIAIMSNDPSEYEEDSFENMKKVAETYVFPFPYVMDEMQEVAKAYGAVCTPDFFGYNADLKLQYRGRLDASRK
ETAPEDVRRDLLEAMKQVAETGYGPKEQIPSMGCSIKWSE
>Mature_200_residues
MKSIKNINVFLKGDIMVSLTTPICDFGQPAIEFDLPGVDGQNWTLEKAKGPNGLLVMFICNHCPYVKAIQERLANDARIL
RDNYGVNSIAIMSNDPSEYEEDSFENMKKVAETYVFPFPYVMDEMQEVAKAYGAVCTPDFFGYNADLKLQYRGRLDASRK
ETAPEDVRRDLLEAMKQVAETGYGPKEQIPSMGCSIKWSE

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22560; Mature: 22560

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIKNINVFLKGDIMVSLTTPICDFGQPAIEFDLPGVDGQNWTLEKAKGPNGLLVMFIC
CCCCCCEEEEEECCEEEEEECCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCEEEEEEC
NHCPYVKAIQERLANDARILRDNYGVNSIAIMSNDPSEYEEDSFENMKKVAETYVFPFPY
CCCCHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHH
VMDEMQEVAKAYGAVCTPDFFGYNADLKLQYRGRLDASRKETAPEDVRRDLLEAMKQVAE
HHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TGYGPKEQIPSMGCSIKWSE
CCCCCHHHCCCCCCEEEECC
>Mature Secondary Structure
MKSIKNINVFLKGDIMVSLTTPICDFGQPAIEFDLPGVDGQNWTLEKAKGPNGLLVMFIC
CCCCCCEEEEEECCEEEEEECCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCEEEEEEC
NHCPYVKAIQERLANDARILRDNYGVNSIAIMSNDPSEYEEDSFENMKKVAETYVFPFPY
CCCCHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHH
VMDEMQEVAKAYGAVCTPDFFGYNADLKLQYRGRLDASRKETAPEDVRRDLLEAMKQVAE
HHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TGYGPKEQIPSMGCSIKWSE
CCCCCHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA