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The map label for this gene is 78484523

Identifier: 78484523

GI number: 78484523

Start: 211556

End: 212077

Strand: Reverse

Name: 78484523

Synonym: Tcr_0178

Alternate gene names: NA

Gene position: 212077-211556 (Counterclockwise)

Preceding gene: 78484530

Following gene: 78484522

Centisome position: 8.74

GC content: 42.53

Gene sequence:

>522_bases
ATGCCGCAACTCAAATCGTCTAAATGGTCGAAAACCACTTATCAACAGTGTGCCGCGTTAATACACTCTCAGCAAAGTCT
TCTGTTATCGACGCTTAGCGATTCGAATACACCGCATGCCAGCTATGCGCCTTTTATTCTGCATCAAGGAACCTTCTACA
TCTTTGTTTCGGCCCTAGCGGAACACACTCAAAACTTATTGAATTACCCTCAAGCCAGTGTATTGATCGTGGAACCGGAA
GAAAATGCGGAAACCATCTTTGCTCGGCAGCGAATCCAACTCCAAGCCAAATCCCATCGTATTTCGCGAGAAGAAAAACA
CTGGCAATCGACACTGGATACATTTGAATCAAATTTTGGCGAAATCATCCAGACTTTACGAGCTCTACCGGATTTTCACT
TGTTCCAACTTCGCCCCGTATCCGGTCTTTACGTCAAAGGATTTGGACAAGCTTATCCGTTAGAATCGGAACAAATAAAA
GAATTATTTTCTTTCAAAAATCAAAGAGTTGATTCCATTTGA

Upstream 100 bases:

>100_bases
TTTGGAATTAAAAAATTAAAGACCATTCTACTCTTTTACACCTCTAAGAGAATCCTCTATCATAGAGTTGCTTTTGACAC
TATTATGCTTAGGAAAGCTT

Downstream 100 bases:

>100_bases
AATTCACCCTGAGTGTCTTCTATAATGAATCTAACGGTATTTCAATTCTGAAATAATCCTCACCGCAAAATAACAGGAGG
CAATATCATGCTTAAACCTG

Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MPQLKSSKWSKTTYQQCAALIHSQQSLLLSTLSDSNTPHASYAPFILHQGTFYIFVSALAEHTQNLLNYPQASVLIVEPE
ENAETIFARQRIQLQAKSHRISREEKHWQSTLDTFESNFGEIIQTLRALPDFHLFQLRPVSGLYVKGFGQAYPLESEQIK
ELFSFKNQRVDSI

Sequences:

>Translated_173_residues
MPQLKSSKWSKTTYQQCAALIHSQQSLLLSTLSDSNTPHASYAPFILHQGTFYIFVSALAEHTQNLLNYPQASVLIVEPE
ENAETIFARQRIQLQAKSHRISREEKHWQSTLDTFESNFGEIIQTLRALPDFHLFQLRPVSGLYVKGFGQAYPLESEQIK
ELFSFKNQRVDSI
>Mature_172_residues
PQLKSSKWSKTTYQQCAALIHSQQSLLLSTLSDSNTPHASYAPFILHQGTFYIFVSALAEHTQNLLNYPQASVLIVEPEE
NAETIFARQRIQLQAKSHRISREEKHWQSTLDTFESNFGEIIQTLRALPDFHLFQLRPVSGLYVKGFGQAYPLESEQIKE
LFSFKNQRVDSI

Specific function: Unknown

COG id: COG0748

COG function: function code P; Putative heme iron utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019595
- InterPro:   IPR011576
- InterPro:   IPR012349
- InterPro:   IPR009002
- InterPro:   IPR014419 [H]

Pfam domain/function: PF10615 DUF2470; PF01243 Pyridox_oxidase [H]

EC number: NA

Molecular weight: Translated: 19858; Mature: 19726

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLKSSKWSKTTYQQCAALIHSQQSLLLSTLSDSNTPHASYAPFILHQGTFYIFVSALA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHH
EHTQNLLNYPQASVLIVEPEENAETIFARQRIQLQAKSHRISREEKHWQSTLDTFESNFG
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EIIQTLRALPDFHLFQLRPVSGLYVKGFGQAYPLESEQIKELFSFKNQRVDSI
HHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PQLKSSKWSKTTYQQCAALIHSQQSLLLSTLSDSNTPHASYAPFILHQGTFYIFVSALA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHH
EHTQNLLNYPQASVLIVEPEENAETIFARQRIQLQAKSHRISREEKHWQSTLDTFESNFG
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EIIQTLRALPDFHLFQLRPVSGLYVKGFGQAYPLESEQIKELFSFKNQRVDSI
HHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]