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The map label for this gene is 78484515

Identifier: 78484515

GI number: 78484515

Start: 201657

End: 202163

Strand: Reverse

Name: 78484515

Synonym: Tcr_0170

Alternate gene names: NA

Gene position: 202163-201657 (Counterclockwise)

Preceding gene: 78484516

Following gene: 78484514

Centisome position: 8.33

GC content: 43.79

Gene sequence:

>507_bases
ATGCATAAATTACCGATTTTAAAAAGTATTCGGCTTTATCTGGTTTCTTTTAGCTTTGTATATCGCAATAACTTTTTCGG
CTTATTAATGGGAATTGCCTTCGGTTTCTTTATGAGCCATGCCGGCGCCACCACTTACGATTACCACGCTAAAATGTTCT
TGTTTCAAGACTTTCAATTATTAATCGTCATTGCGATGGCTGTAGTGATTGCCATGATAGGCGTGACCTTGCTGAAAAAA
TTCCATGTCACGGCCATTGCGACGGGGGCTGAAGTTGATTTTGTTAAAAAGCCTTACCAAAAGGGCCTCATTGCCGGCGC
GATGTTATTTGGAATTGGCTGGGGAATGACAGCGTCCTGCCCTGGCACCATTCCAGCGATGATTGGGGAAGGAAAAGTTG
CGGGCATCTTTGCGTTGATCGGGTTGCTGATCGGCACGATGGCTTACGGTATTTTACAAAGCTATATCCGTCTCGAAAAA
GCTCAAAAAAACACTTCGGATTCGTAA

Upstream 100 bases:

>100_bases
TGCCATGCTGAACCCGCCTAGTCTACTCGCTGGCGCGATATTCTTTATGAGTGCCTTTTTAACCACTCACTTATTATTTG
GAACTTAAAGGAATCTAACA

Downstream 100 bases:

>100_bases
GAAATCGATTTAACCCCTGATGAATGAAAGTCAGCGACCCACAAAAGTTCGCTGACTCAAAATCGTTCTTCCGCTCAATA
CTGGGCTTTACTTCCGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MHKLPILKSIRLYLVSFSFVYRNNFFGLLMGIAFGFFMSHAGATTYDYHAKMFLFQDFQLLIVIAMAVVIAMIGVTLLKK
FHVTAIATGAEVDFVKKPYQKGLIAGAMLFGIGWGMTASCPGTIPAMIGEGKVAGIFALIGLLIGTMAYGILQSYIRLEK
AQKNTSDS

Sequences:

>Translated_168_residues
MHKLPILKSIRLYLVSFSFVYRNNFFGLLMGIAFGFFMSHAGATTYDYHAKMFLFQDFQLLIVIAMAVVIAMIGVTLLKK
FHVTAIATGAEVDFVKKPYQKGLIAGAMLFGIGWGMTASCPGTIPAMIGEGKVAGIFALIGLLIGTMAYGILQSYIRLEK
AQKNTSDS
>Mature_168_residues
MHKLPILKSIRLYLVSFSFVYRNNFFGLLMGIAFGFFMSHAGATTYDYHAKMFLFQDFQLLIVIAMAVVIAMIGVTLLKK
FHVTAIATGAEVDFVKKPYQKGLIAGAMLFGIGWGMTASCPGTIPAMIGEGKVAGIFALIGLLIGTMAYGILQSYIRLEK
AQKNTSDS

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18333; Mature: 18333

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKLPILKSIRLYLVSFSFVYRNNFFGLLMGIAFGFFMSHAGATTYDYHAKMFLFQDFQL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LIVIAMAVVIAMIGVTLLKKFHVTAIATGAEVDFVKKPYQKGLIAGAMLFGIGWGMTASC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PGTIPAMIGEGKVAGIFALIGLLIGTMAYGILQSYIRLEKAQKNTSDS
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHKLPILKSIRLYLVSFSFVYRNNFFGLLMGIAFGFFMSHAGATTYDYHAKMFLFQDFQL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LIVIAMAVVIAMIGVTLLKKFHVTAIATGAEVDFVKKPYQKGLIAGAMLFGIGWGMTASC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PGTIPAMIGEGKVAGIFALIGLLIGTMAYGILQSYIRLEKAQKNTSDS
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA