| Definition | Thiomicrospira crunogena XCL-2, complete genome. |
|---|---|
| Accession | NC_007520 |
| Length | 2,427,734 |
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The map label for this gene is yeaC [H]
Identifier: 78484422
GI number: 78484422
Start: 95671
End: 96642
Strand: Reverse
Name: yeaC [H]
Synonym: Tcr_0076
Alternate gene names: 78484422
Gene position: 96642-95671 (Counterclockwise)
Preceding gene: 78484423
Following gene: 78484421
Centisome position: 3.98
GC content: 47.43
Gene sequence:
>972_bases ATGTCATCACTTTCAGAATTACAAAATAAAGTTCAAACGTTATTAGCCTATTTAGATCAGCAAATTATCGGTCAATCGCA CTTAACGCGACGCATGCTTATTGCCTTATTATCCGATGGCCACATGCTGGTGGAAGGGCCTCCGGGTCTCGCCAAAACCA AAGCGATTAAAACCCTGTCCGAATTAATAGAAGGCAATTATCAACGTATCCAGTTCACGCCAGATTTATTGCCTTCCGAC ATCACTGGGACAGAAATTTACCAACAAGCCACCGGTGAATTTGTGCTGCAAAACGGGCCCATTTTTCACAACCTGATTCT GGCGGATGAAATCAACCGAGCGCCTGCCAAAGTTCAATCGGCTTTACTTGAAGCGATGGCCGAAGAACAAGTGACCGTGG GCAAGCATACCTTGCCGCTGGATCGGCTGTTTATGGTAATGGCCACGCAAAACCCCATCGAACAAGAAGGTACCTATCCG CTGCCGGAAGCACAACTGGATCGATTTATGATGCATGTCAAAATCGATTACCCGAATTCCGAATCGGAAAAACGTATTTT GGACTTGGTCGAGCTGGAAGCAAGAGATCAAAATGAACCCACTCCGGAACTGCTTTCACAGGACGAACTTTTCAGCGCAC GAGAAGAAATCTTAAACCTTTATTTATCCGAAGAAACCAAGACCTATATCGTGGAACTGGTGATGGCCACCCGTCAGGCA GAAAAATATGATGAGACGCTGGCACGTGCCATTGAGTACGGCGTCAGTCCTCGTGCCACAGTGGCTTTATCTCGAGCTGC CCGCTCTCTCGCTTGGCTAAAAGGGCAAGACTTCGTCTCTCCAGAAGAAGTACAAGCGGTGGTTCACGATGTTTTCCGCC ACCGCTTATTGACCAGCTTTGAAGCGGAGGCAAATGGATTGACCCCTGACGCCATTATTGACCAGATCTTGAAACGCGTT CCCGTTATTTAA
Upstream 100 bases:
>100_bases TCCACTTTCTTTTACTGTTTTCTCCATTGAGAATTAATTCAAAGCTCTTATAATGTTTGAATTGATTCATCAAGACTGCC TTATCGAAACAGGAATGCCG
Downstream 100 bases:
>100_bases TCGCACGAATCACAGGACTTTTTCATGTCTGATCACGCTGACATTTATTCACAACTGGATGAACTCATTGGGTTGAGGTT TCACGTGAAACAACATCATC
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSSLSELQNKVQTLLAYLDQQIIGQSHLTRRMLIALLSDGHMLVEGPPGLAKTKAIKTLSELIEGNYQRIQFTPDLLPSD ITGTEIYQQATGEFVLQNGPIFHNLILADEINRAPAKVQSALLEAMAEEQVTVGKHTLPLDRLFMVMATQNPIEQEGTYP LPEAQLDRFMMHVKIDYPNSESEKRILDLVELEARDQNEPTPELLSQDELFSAREEILNLYLSEETKTYIVELVMATRQA EKYDETLARAIEYGVSPRATVALSRAARSLAWLKGQDFVSPEEVQAVVHDVFRHRLLTSFEAEANGLTPDAIIDQILKRV PVI
Sequences:
>Translated_323_residues MSSLSELQNKVQTLLAYLDQQIIGQSHLTRRMLIALLSDGHMLVEGPPGLAKTKAIKTLSELIEGNYQRIQFTPDLLPSD ITGTEIYQQATGEFVLQNGPIFHNLILADEINRAPAKVQSALLEAMAEEQVTVGKHTLPLDRLFMVMATQNPIEQEGTYP LPEAQLDRFMMHVKIDYPNSESEKRILDLVELEARDQNEPTPELLSQDELFSAREEILNLYLSEETKTYIVELVMATRQA EKYDETLARAIEYGVSPRATVALSRAARSLAWLKGQDFVSPEEVQAVVHDVFRHRLLTSFEAEANGLTPDAIIDQILKRV PVI >Mature_322_residues SSLSELQNKVQTLLAYLDQQIIGQSHLTRRMLIALLSDGHMLVEGPPGLAKTKAIKTLSELIEGNYQRIQFTPDLLPSDI TGTEIYQQATGEFVLQNGPIFHNLILADEINRAPAKVQSALLEAMAEEQVTVGKHTLPLDRLFMVMATQNPIEQEGTYPL PEAQLDRFMMHVKIDYPNSESEKRILDLVELEARDQNEPTPELLSQDELFSAREEILNLYLSEETKTYIVELVMATRQAE KYDETLARAIEYGVSPRATVALSRAARSLAWLKGQDFVSPEEVQAVVHDVFRHRLLTSFEAEANGLTPDAIIDQILKRVP VI
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 36334; Mature: 36203
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLSELQNKVQTLLAYLDQQIIGQSHLTRRMLIALLSDGHMLVEGPPGLAKTKAIKTLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH ELIEGNYQRIQFTPDLLPSDITGTEIYQQATGEFVLQNGPIFHNLILADEINRAPAKVQS HHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCHHHHHH ALLEAMAEEQVTVGKHTLPLDRLFMVMATQNPIEQEGTYPLPEAQLDRFMMHVKIDYPNS HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEEEEEEECCCC ESEKRILDLVELEARDQNEPTPELLSQDELFSAREEILNLYLSEETKTYIVELVMATRQA CHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH EKYDETLARAIEYGVSPRATVALSRAARSLAWLKGQDFVSPEEVQAVVHDVFRHRLLTSF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH EAEANGLTPDAIIDQILKRVPVI HHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SSLSELQNKVQTLLAYLDQQIIGQSHLTRRMLIALLSDGHMLVEGPPGLAKTKAIKTLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH ELIEGNYQRIQFTPDLLPSDITGTEIYQQATGEFVLQNGPIFHNLILADEINRAPAKVQS HHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCHHHHHH ALLEAMAEEQVTVGKHTLPLDRLFMVMATQNPIEQEGTYPLPEAQLDRFMMHVKIDYPNS HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEEEEEEECCCC ESEKRILDLVELEARDQNEPTPELLSQDELFSAREEILNLYLSEETKTYIVELVMATRQA CHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH EKYDETLARAIEYGVSPRATVALSRAARSLAWLKGQDFVSPEEVQAVVHDVFRHRLLTSF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH EAEANGLTPDAIIDQILKRVPVI HHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]