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The map label for this gene is 78484388

Identifier: 78484388

GI number: 78484388

Start: 50787

End: 51536

Strand: Reverse

Name: 78484388

Synonym: Tcr_0042

Alternate gene names: NA

Gene position: 51536-50787 (Counterclockwise)

Preceding gene: 78484389

Following gene: 78484385

Centisome position: 2.12

GC content: 42.27

Gene sequence:

>750_bases
ATGCAGAACTTACTGAGGAATCTTTGGTTTCGTGATCCCAAAGAAGAAACAACGTTTATCAATGATAATGCCGTGAAAAT
TCGTGCCGGTATTTTATTGATTATTCCGATTTATATGACGTTTACCTTAATTGACGTAGTGTTTGGACCAACGTGGAATG
TCCTGCAAAACACCACTATGATTGATACACTGGAAACCGACTGGAACTGGCACACCATTTATCAAGTGCAGGCCACCCAA
CGCGCTTATGATTACACTATTCAAACCTGGGTATTGTTTTACGGTTTGTTTGAAATGATTGCCGGTATGTTCGTGACCAC
TTCTCGTTTGTCTCCAACCATTTATATCGCAACTTTGCTCGCTAAAAAAGATAAGCCGAATTGGAAGCCATTGGTACCGA
AACGATTTGCTTGGACGATTGGTGCCACCTTTATTACGGTGTGTTTGATCTTCTTCAACCCGGACGTGTTTGCAAACTGG
GTCAACACCTTATTTGGCAGTAAACTGCTGCCCACAACTGAAAATTATATGCCGGACTGGATTCCGTTAGTGTTGGTATG
GATTTGTTTAGGTTTTATGTGGCTGGAAGCAATTCTAGGTTTTTGTGTCGGTTGCCAAGTGCATGCGCTGTTGGTGAAGC
TCGGCATTTTCAAAGAAGAGTGTTTGGAGTGTAACAATATCGATTGGGAAGAAATCGCCCGTCGTAATGAAGAACGCAAA
GCCAAAGAAGCGGCTGAAAATAAGTCCTAA

Upstream 100 bases:

>100_bases
TTTTGGGTCTGTATTGTTATATTGATGTAACAAAAATATAAGCACTTAATAATATCTCATTCTTGACTTCCCAATGACGA
ATAAGAAAAAAGGGGGTTCT

Downstream 100 bases:

>100_bases
GTACGGGGCGTTGAGTTCTTGTTAAAAAACCGCCAAGCCTGGCGGTTTTTTATATCTGGCAGCAACGATTATTTCGCAGG
ATCAATCTGCCCGGCAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MQNLLRNLWFRDPKEETTFINDNAVKIRAGILLIIPIYMTFTLIDVVFGPTWNVLQNTTMIDTLETDWNWHTIYQVQATQ
RAYDYTIQTWVLFYGLFEMIAGMFVTTSRLSPTIYIATLLAKKDKPNWKPLVPKRFAWTIGATFITVCLIFFNPDVFANW
VNTLFGSKLLPTTENYMPDWIPLVLVWICLGFMWLEAILGFCVGCQVHALLVKLGIFKEECLECNNIDWEEIARRNEERK
AKEAAENKS

Sequences:

>Translated_249_residues
MQNLLRNLWFRDPKEETTFINDNAVKIRAGILLIIPIYMTFTLIDVVFGPTWNVLQNTTMIDTLETDWNWHTIYQVQATQ
RAYDYTIQTWVLFYGLFEMIAGMFVTTSRLSPTIYIATLLAKKDKPNWKPLVPKRFAWTIGATFITVCLIFFNPDVFANW
VNTLFGSKLLPTTENYMPDWIPLVLVWICLGFMWLEAILGFCVGCQVHALLVKLGIFKEECLECNNIDWEEIARRNEERK
AKEAAENKS
>Mature_249_residues
MQNLLRNLWFRDPKEETTFINDNAVKIRAGILLIIPIYMTFTLIDVVFGPTWNVLQNTTMIDTLETDWNWHTIYQVQATQ
RAYDYTIQTWVLFYGLFEMIAGMFVTTSRLSPTIYIATLLAKKDKPNWKPLVPKRFAWTIGATFITVCLIFFNPDVFANW
VNTLFGSKLLPTTENYMPDWIPLVLVWICLGFMWLEAILGFCVGCQVHALLVKLGIFKEECLECNNIDWEEIARRNEERK
AKEAAENKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29024; Mature: 29024

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLLRNLWFRDPKEETTFINDNAVKIRAGILLIIPIYMTFTLIDVVFGPTWNVLQNTTM
CHHHHHHHHCCCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC
IDTLETDWNWHTIYQVQATQRAYDYTIQTWVLFYGLFEMIAGMFVTTSRLSPTIYIATLL
EEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AKKDKPNWKPLVPKRFAWTIGATFITVCLIFFNPDVFANWVNTLFGSKLLPTTENYMPDW
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCH
IPLVLVWICLGFMWLEAILGFCVGCQVHALLVKLGIFKEECLECNNIDWEEIARRNEERK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHH
AKEAAENKS
HHHHHCCCC
>Mature Secondary Structure
MQNLLRNLWFRDPKEETTFINDNAVKIRAGILLIIPIYMTFTLIDVVFGPTWNVLQNTTM
CHHHHHHHHCCCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC
IDTLETDWNWHTIYQVQATQRAYDYTIQTWVLFYGLFEMIAGMFVTTSRLSPTIYIATLL
EEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AKKDKPNWKPLVPKRFAWTIGATFITVCLIFFNPDVFANWVNTLFGSKLLPTTENYMPDW
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCH
IPLVLVWICLGFMWLEAILGFCVGCQVHALLVKLGIFKEECLECNNIDWEEIARRNEERK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHH
AKEAAENKS
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA