| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358738
Identifier: 78358738
GI number: 78358738
Start: 3660845
End: 3663013
Strand: Direct
Name: 78358738
Synonym: Dde_3699
Alternate gene names: NA
Gene position: 3660845-3663013 (Clockwise)
Preceding gene: 78358737
Following gene: 78358739
Centisome position: 98.14
GC content: 62.89
Gene sequence:
>2169_bases TTGACCATCCTTCACGTCTCCGCATCCCCTGCCGCAGGCCGCAAGCAGCTGGTCGTGCTGTGTACTGCCGCCTATTGCAT AGCGCTGGGGGTACGGCTGCTGGAACTGCCCGGCTGGAGCGCCTATGACGCTCTGTACAAAGGTGAACACCTGCTGGCCA CGCATGATGCCTATCACTGGCTGGCCGCGGCAACGGGATTTGAATTCGACCAGCAGCACCCGCTGGCCCGTATGCTGGCT TTTCTCCATTCACTCACCGGCATTGCCTGCGGCAATCTGGCCTTTTATCTGCCCGCCGTCATGGCCTGCCTTGTGGCACC GCTCATGGTCGGCTGGGGCGCCGCGCTGGGCATGCCTCTGGCCGGATTCACCGCGGGACTGCTTACGGCATGCGCCCCCG GACTGATGACCAGAACAGGGCTGGGTTATTACGATACCGACCTGCTCATTTCCGGAGCTCTCATCGTCAACACGCTGGTG CCTGCCCTCTGGCTGCGCAACAGCCTGCACAACCCGCTGCGGACCATCAGCGCCGCACTGCGCCGCCCCTCCGCCGCAGA GCAGCCCGCCCCCCCGCCGGCTGCGGAAAGCACCGGCCCGGTATGGTTCGCCGTATTGCTCTGCTGCGGGCTGTTTGTGT ACTGGCAGCCGGCCATCCACAACATGTTCAACCTGATGGGCAAAGCCTTTCCGGGCATCGCCCTTGTGCTTGCCGCCCTG CTGGGACGCCGTGCCGCCATGCGCCGCACGGCGGAGGGGTTGCTCATATACATATTCTGCGCTCTTGCCGGTCCCGCAGG CGCCGGGGCAGCCATGCTGCTGTGGCTTGCCGGCCGTAAAAATCCCCGCTCGCTGGACAGGCTGTACACGGGCAGGCGCG CCCTGTTTGCGGCGCTTGTGCTGCTGGCGGCCGCCACTGCGCTTGAGCCTGCCGGTCTCAACTACATGCGCAGCGCCATC AAAGGCTATTCCGGTGAAAAAAGCGCCGTGGTGGCCCATACCCTGAGTTATCCTTCCGTGGTGGGCAGCATCATCGAAGC ACAGAAACTCTCCTTCGACGCGTTCCTCACCAGCGTTCACGGCTGGACATGGCTTGCCGCGGGCGGACTTGCACTCTTTT TTCTGCTTATGCTTGCAGAACCCGTGACCGCCCTGCTGCTGCCTCTGGCGGCCATGGGACTGGGCAGTGTGGCGCTGGGT GCGCGTTTTGCCATGTTCGCGGCTCCGTGTTTTGCACTGGGCACAGCGTGGGCTCTGCATCTTGCCGTTCACGGTGCGGC CCGTCTGGCACACCGCAACGCGGCGCAGCCGCTGCCGGCGCCGCACAGGCGCGCCGCCATGCTGTGTTCGGTGGCAGCCG CATGCATCATGTGCTGGCCTTCGGCACAGCTTGCCGCCGCGCTGGCACAAGGTCCCATCATTTCCACCCGTCAGGTGGAA GCGCTGGACTTCATCCGCGGCAACACGCCGGAAGACTCCATGCTGTGGTACTGGTGGGACTGGGGGTACGCCGCACAATA TTACGCCAGACGCACCACCGTGGCAGACGGAGCGCGCCACTCCAACCAGCGCATCTACGCCCCTGCCGCGGTGCTGACCA CCGACGTGCCCCGCTTTGCCAACCAGCTCATCAAATACGTGGCCGGTGCGCAGCCTCCCGTTTCCGGCGCATTTGCCGGA CTTGATGCCGGTCAGACCATGGAGAAGCTGCACTCTTTCTATCTGCGCGAGACACAGCCGTCCCCGCCGCAGAAACAGTA CCTCATCGTTTCCGCGGAACAGCTGCGGCTGGGAGCATGGATCAGCCGCTTCGGCACATGGGATTTCAACACCCGGCAGT GGGAAGAGACAACGGTGCTGGCCATCGACCGTCCGGTGCAGTACAGCCCGCAGAAAGGCCTGTTCCTTATAAAGGGGCTT GATCCCATGCAGGCGGAATCCCTGACCGTGTTTGAGGGTACCCGGGTTGTCAATCACCAGTATCCGCATTTCAGCGGCAG ACATTTTGTCATCGACAAGGATCAGGGGATGATTCTGGTCGTGGACAGGACCGTATACAACAGCATGGCACTGCAGCTGC TTGTCAACGACGGTTCCAACGAAGATATCAGCCGGTACTTCCGGCTTGTGTTCAGCAACGGCAAGACCAAGGTGTACGAA GTGCTGTAG
Upstream 100 bases:
>100_bases GCCTGCGGGGCTTTACCGCCATGCCGCGGCAGCTTATATGCGCATGGCGCGTTTTTTCAGATAGTCTGACGCCACAACCT CCGCACCACGGGAGCCGCCC
Downstream 100 bases:
>100_bases CCGGACGGAAGCTTTTTCCGGCGCCGCGCATATGGTATATATTTACACGGCACACGCCGTGTGCCTGTACTCTTTGCAAG GGAGAATGACCATGGCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 722; Mature: 721
Protein sequence:
>722_residues MTILHVSASPAAGRKQLVVLCTAAYCIALGVRLLELPGWSAYDALYKGEHLLATHDAYHWLAAATGFEFDQQHPLARMLA FLHSLTGIACGNLAFYLPAVMACLVAPLMVGWGAALGMPLAGFTAGLLTACAPGLMTRTGLGYYDTDLLISGALIVNTLV PALWLRNSLHNPLRTISAALRRPSAAEQPAPPPAAESTGPVWFAVLLCCGLFVYWQPAIHNMFNLMGKAFPGIALVLAAL LGRRAAMRRTAEGLLIYIFCALAGPAGAGAAMLLWLAGRKNPRSLDRLYTGRRALFAALVLLAAATALEPAGLNYMRSAI KGYSGEKSAVVAHTLSYPSVVGSIIEAQKLSFDAFLTSVHGWTWLAAGGLALFFLLMLAEPVTALLLPLAAMGLGSVALG ARFAMFAAPCFALGTAWALHLAVHGAARLAHRNAAQPLPAPHRRAAMLCSVAAACIMCWPSAQLAAALAQGPIISTRQVE ALDFIRGNTPEDSMLWYWWDWGYAAQYYARRTTVADGARHSNQRIYAPAAVLTTDVPRFANQLIKYVAGAQPPVSGAFAG LDAGQTMEKLHSFYLRETQPSPPQKQYLIVSAEQLRLGAWISRFGTWDFNTRQWEETTVLAIDRPVQYSPQKGLFLIKGL DPMQAESLTVFEGTRVVNHQYPHFSGRHFVIDKDQGMILVVDRTVYNSMALQLLVNDGSNEDISRYFRLVFSNGKTKVYE VL
Sequences:
>Translated_722_residues MTILHVSASPAAGRKQLVVLCTAAYCIALGVRLLELPGWSAYDALYKGEHLLATHDAYHWLAAATGFEFDQQHPLARMLA FLHSLTGIACGNLAFYLPAVMACLVAPLMVGWGAALGMPLAGFTAGLLTACAPGLMTRTGLGYYDTDLLISGALIVNTLV PALWLRNSLHNPLRTISAALRRPSAAEQPAPPPAAESTGPVWFAVLLCCGLFVYWQPAIHNMFNLMGKAFPGIALVLAAL LGRRAAMRRTAEGLLIYIFCALAGPAGAGAAMLLWLAGRKNPRSLDRLYTGRRALFAALVLLAAATALEPAGLNYMRSAI KGYSGEKSAVVAHTLSYPSVVGSIIEAQKLSFDAFLTSVHGWTWLAAGGLALFFLLMLAEPVTALLLPLAAMGLGSVALG ARFAMFAAPCFALGTAWALHLAVHGAARLAHRNAAQPLPAPHRRAAMLCSVAAACIMCWPSAQLAAALAQGPIISTRQVE ALDFIRGNTPEDSMLWYWWDWGYAAQYYARRTTVADGARHSNQRIYAPAAVLTTDVPRFANQLIKYVAGAQPPVSGAFAG LDAGQTMEKLHSFYLRETQPSPPQKQYLIVSAEQLRLGAWISRFGTWDFNTRQWEETTVLAIDRPVQYSPQKGLFLIKGL DPMQAESLTVFEGTRVVNHQYPHFSGRHFVIDKDQGMILVVDRTVYNSMALQLLVNDGSNEDISRYFRLVFSNGKTKVYE VL >Mature_721_residues TILHVSASPAAGRKQLVVLCTAAYCIALGVRLLELPGWSAYDALYKGEHLLATHDAYHWLAAATGFEFDQQHPLARMLAF LHSLTGIACGNLAFYLPAVMACLVAPLMVGWGAALGMPLAGFTAGLLTACAPGLMTRTGLGYYDTDLLISGALIVNTLVP ALWLRNSLHNPLRTISAALRRPSAAEQPAPPPAAESTGPVWFAVLLCCGLFVYWQPAIHNMFNLMGKAFPGIALVLAALL GRRAAMRRTAEGLLIYIFCALAGPAGAGAAMLLWLAGRKNPRSLDRLYTGRRALFAALVLLAAATALEPAGLNYMRSAIK GYSGEKSAVVAHTLSYPSVVGSIIEAQKLSFDAFLTSVHGWTWLAAGGLALFFLLMLAEPVTALLLPLAAMGLGSVALGA RFAMFAAPCFALGTAWALHLAVHGAARLAHRNAAQPLPAPHRRAAMLCSVAAACIMCWPSAQLAAALAQGPIISTRQVEA LDFIRGNTPEDSMLWYWWDWGYAAQYYARRTTVADGARHSNQRIYAPAAVLTTDVPRFANQLIKYVAGAQPPVSGAFAGL DAGQTMEKLHSFYLRETQPSPPQKQYLIVSAEQLRLGAWISRFGTWDFNTRQWEETTVLAIDRPVQYSPQKGLFLIKGLD PMQAESLTVFEGTRVVNHQYPHFSGRHFVIDKDQGMILVVDRTVYNSMALQLLVNDGSNEDISRYFRLVFSNGKTKVYEV L
Specific function: Unknown
COG id: COG1287
COG function: function code R; Uncharacterized membrane protein, required for N-linked glycosylation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78129; Mature: 77998
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILHVSASPAAGRKQLVVLCTAAYCIALGVRLLELPGWSAYDALYKGEHLLATHDAYHW CEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEECHHHHH LAAATGFEFDQQHPLARMLAFLHSLTGIACGNLAFYLPAVMACLVAPLMVGWGAALGMPL HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AGFTAGLLTACAPGLMTRTGLGYYDTDLLISGALIVNTLVPALWLRNSLHNPLRTISAAL HHHHHHHHHHHCCCHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RRPSAAEQPAPPPAAESTGPVWFAVLLCCGLFVYWQPAIHNMFNLMGKAFPGIALVLAAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LGRRAAMRRTAEGLLIYIFCALAGPAGAGAAMLLWLAGRKNPRSLDRLYTGRRALFAALV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLAAATALEPAGLNYMRSAIKGYSGEKSAVVAHTLSYPSVVGSIIEAQKLSFDAFLTSVH HHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC GWTWLAAGGLALFFLLMLAEPVTALLLPLAAMGLGSVALGARFAMFAAPCFALGTAWALH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAVHGAARLAHRNAAQPLPAPHRRAAMLCSVAAACIMCWPSAQLAAALAQGPIISTRQVE HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHH ALDFIRGNTPEDSMLWYWWDWGYAAQYYARRTTVADGARHSNQRIYAPAAVLTTDVPRFA HHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHCHHHHH NQLIKYVAGAQPPVSGAFAGLDAGQTMEKLHSFYLRETQPSPPQKQYLIVSAEQLRLGAW HHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHH ISRFGTWDFNTRQWEETTVLAIDRPVQYSPQKGLFLIKGLDPMQAESLTVFEGTRVVNHQ HHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEECCEEECCC YPHFSGRHFVIDKDQGMILVVDRTVYNSMALQLLVNDGSNEDISRYFRLVFSNGKTKVYE CCCCCCCEEEEECCCCEEEEEEHHHHHCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEE VL EC >Mature Secondary Structure TILHVSASPAAGRKQLVVLCTAAYCIALGVRLLELPGWSAYDALYKGEHLLATHDAYHW EEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEECHHHHH LAAATGFEFDQQHPLARMLAFLHSLTGIACGNLAFYLPAVMACLVAPLMVGWGAALGMPL HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AGFTAGLLTACAPGLMTRTGLGYYDTDLLISGALIVNTLVPALWLRNSLHNPLRTISAAL HHHHHHHHHHHCCCHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RRPSAAEQPAPPPAAESTGPVWFAVLLCCGLFVYWQPAIHNMFNLMGKAFPGIALVLAAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LGRRAAMRRTAEGLLIYIFCALAGPAGAGAAMLLWLAGRKNPRSLDRLYTGRRALFAALV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLAAATALEPAGLNYMRSAIKGYSGEKSAVVAHTLSYPSVVGSIIEAQKLSFDAFLTSVH HHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC GWTWLAAGGLALFFLLMLAEPVTALLLPLAAMGLGSVALGARFAMFAAPCFALGTAWALH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAVHGAARLAHRNAAQPLPAPHRRAAMLCSVAAACIMCWPSAQLAAALAQGPIISTRQVE HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHH ALDFIRGNTPEDSMLWYWWDWGYAAQYYARRTTVADGARHSNQRIYAPAAVLTTDVPRFA HHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHCHHHHH NQLIKYVAGAQPPVSGAFAGLDAGQTMEKLHSFYLRETQPSPPQKQYLIVSAEQLRLGAW HHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHH ISRFGTWDFNTRQWEETTVLAIDRPVQYSPQKGLFLIKGLDPMQAESLTVFEGTRVVNHQ HHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEECCEEECCC YPHFSGRHFVIDKDQGMILVVDRTVYNSMALQLLVNDGSNEDISRYFRLVFSNGKTKVYE CCCCCCCEEEEECCCCEEEEEEHHHHHCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEE VL EC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA