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The map label for this gene is kfoC [H]

Identifier: 78358717

GI number: 78358717

Start: 3639501

End: 3640901

Strand: Reverse

Name: kfoC [H]

Synonym: Dde_3678

Alternate gene names: 78358717

Gene position: 3640901-3639501 (Counterclockwise)

Preceding gene: 78358718

Following gene: 78358716

Centisome position: 97.61

GC content: 60.31

Gene sequence:

>1401_bases
ATGGCTAGCCAACCGCTTGTTACGGTCTACATCACCAATTACAATTACGGCAGGTTTCTGCGTCAGGCTGTGGAAAGCGT
GTTTGCCCAGACCCTGCACGATTATGAGCTGCTCATCATTGATGACGGTTCCACGGACGGGTCGCGCGATATCGTGCTGG
AATATGAGGGGCGCCCCGGGGTGCGCGTACTGCTGCAGCAGAACGCCGGGCTGAACCGCACCAGCAACACGGCCCTTGGC
ATGGCACGCGGGCGGTACATCATGCGGCTGGATGCCGATGATTATCTGGCACCCGAAGCGCTGGCCGTCATGACGGATAT
TCTGGAGCGCAACCCTTCCGTGGGGCTTGTCTTTCCCGATTATTATTACGTTGATGAAAACGGGGCCGTTATCGGCAGAG
AGATCCGCAACGATTTCAACGGCGGTGTTTCGCTGCCCGATATGCCGGCGCACGGCGCGTGCACGCTTATCAGGCGGTCA
CATCTGCTGAGCGTGGGCGGCTATAGCGAAGAATTCCGCTGTCAGGACGGGTATGACCTGTGGTTGCGGTTTATTGAAAA
GCACGATGTGCGCAACGTTAACGAACCGTTGTTTTACTATCGCCAGCATGGCGGCAGTCTGTCGGGCGACCGCAGGATGA
TTGTGGAAACCCGCGCGCGCATCAAAGAGGCGCATGCCCGCAGAAGCAACCGGCCGGCCTGTCCCACACTGGCGTTTGTT
CCTGTACGCGGGCTTTCCGTGGACCCCCACTGTCTGGCGCTGGAGCAGCTGGGCGGCAGAACGCTGCTGGACTGGACGCT
GGATGCCGCGCTGGAGGCAACGCAGCTGTGCGGTGTGGCTGTCACCACGCCCGATGCGGCAGTGATGGACCATGTGCGGC
GGCGGTACGGCAGCGCTGTGCACATTGTGGAGCGTCCCAGAGCGTTTGCCCGCAGCAATACCGCGCTGCATGACACCCTG
CAGCACGTGCTGGACAGTCTGCCTCTGCTGGCCCGTCAGGCCCGCGCCTGCATGATGCTGTCAGTGGAGACGCCTTTCCG
CAGCAGCCTGTACATTGACAAGGCCGTCAATACGGCACGTATTTTCGACGTTGATACGGTGATACCCGTCAACCCTGAGA
ATGATCTTTTTTTCCGGCATGACGGCACGGGGCTGCAGCTGGTTGGCAACAATCAGCGTTACGGCGGCATGCGGTTCGAG
CGTGAGTATCTTTTCCGTGCCGTGCCGGGGCTGCACCTGCTTACCCGCGGCTGGTACGAAAAAAGCCCGCACTGGCTGGG
CGACAGGGTGGGGCACATAGTGCTGGCAGGTGACGCGCTGCATGTGGTGTCTTCTGCGCGCGATCTGGCTGTTGCCGAAA
CGTTGCTGCGTCTGGAGCGTGAACGTATATGTGCGGAATAG

Upstream 100 bases:

>100_bases
GAAGATTTTGCCCTGTTTGAGCGTATGCTGGCCAGAATGGACCGGCCGCATACGGCCTATGCCGCCCATGAAATAATCGA
ACTGTACAGGGAATGCCTGC

Downstream 100 bases:

>100_bases
CAGGGTACATAGGCAGGCGCTGTCTTCCGGATGACGCCGTGCGGCGCTGCCATGCGGCCATGCGCCACCGCGGGCCGGAC
GGCAGCGGCACATTCCGGCG

Product: cell wall biosynthesis glycosyltransferase-like protein

Products: NA

Alternate protein names: CS; Chondroitin polymerase; Glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase; UDP-GalNAc transferase; N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase; UDP-GlcUA transferase [H]

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MASQPLVTVYITNYNYGRFLRQAVESVFAQTLHDYELLIIDDGSTDGSRDIVLEYEGRPGVRVLLQQNAGLNRTSNTALG
MARGRYIMRLDADDYLAPEALAVMTDILERNPSVGLVFPDYYYVDENGAVIGREIRNDFNGGVSLPDMPAHGACTLIRRS
HLLSVGGYSEEFRCQDGYDLWLRFIEKHDVRNVNEPLFYYRQHGGSLSGDRRMIVETRARIKEAHARRSNRPACPTLAFV
PVRGLSVDPHCLALEQLGGRTLLDWTLDAALEATQLCGVAVTTPDAAVMDHVRRRYGSAVHIVERPRAFARSNTALHDTL
QHVLDSLPLLARQARACMMLSVETPFRSSLYIDKAVNTARIFDVDTVIPVNPENDLFFRHDGTGLQLVGNNQRYGGMRFE
REYLFRAVPGLHLLTRGWYEKSPHWLGDRVGHIVLAGDALHVVSSARDLAVAETLLRLERERICAE

Sequences:

>Translated_466_residues
MASQPLVTVYITNYNYGRFLRQAVESVFAQTLHDYELLIIDDGSTDGSRDIVLEYEGRPGVRVLLQQNAGLNRTSNTALG
MARGRYIMRLDADDYLAPEALAVMTDILERNPSVGLVFPDYYYVDENGAVIGREIRNDFNGGVSLPDMPAHGACTLIRRS
HLLSVGGYSEEFRCQDGYDLWLRFIEKHDVRNVNEPLFYYRQHGGSLSGDRRMIVETRARIKEAHARRSNRPACPTLAFV
PVRGLSVDPHCLALEQLGGRTLLDWTLDAALEATQLCGVAVTTPDAAVMDHVRRRYGSAVHIVERPRAFARSNTALHDTL
QHVLDSLPLLARQARACMMLSVETPFRSSLYIDKAVNTARIFDVDTVIPVNPENDLFFRHDGTGLQLVGNNQRYGGMRFE
REYLFRAVPGLHLLTRGWYEKSPHWLGDRVGHIVLAGDALHVVSSARDLAVAETLLRLERERICAE
>Mature_465_residues
ASQPLVTVYITNYNYGRFLRQAVESVFAQTLHDYELLIIDDGSTDGSRDIVLEYEGRPGVRVLLQQNAGLNRTSNTALGM
ARGRYIMRLDADDYLAPEALAVMTDILERNPSVGLVFPDYYYVDENGAVIGREIRNDFNGGVSLPDMPAHGACTLIRRSH
LLSVGGYSEEFRCQDGYDLWLRFIEKHDVRNVNEPLFYYRQHGGSLSGDRRMIVETRARIKEAHARRSNRPACPTLAFVP
VRGLSVDPHCLALEQLGGRTLLDWTLDAALEATQLCGVAVTTPDAAVMDHVRRRYGSAVHIVERPRAFARSNTALHDTLQ
HVLDSLPLLARQARACMMLSVETPFRSSLYIDKAVNTARIFDVDTVIPVNPENDLFFRHDGTGLQLVGNNQRYGGMRFER
EYLFRAVPGLHLLTRGWYEKSPHWLGDRVGHIVLAGDALHVVSSARDLAVAETLLRLERERICAE

Specific function: Catalyzes the polymerization of chondroitin, a polysaccharide composed of a repeating disaccharide of N- acetylgalactosamine (GalNAc) and glucuronic acid (GlcUA) units. Each unit has the composition in beta-(1->4)-GlcUA-beta-(1->3)- GalNAc [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. CS/HAS subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=173, Percent_Identity=34.1040462427746, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.4.1.175; =2.4.1.226 [H]

Molecular weight: Translated: 52377; Mature: 52246

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQPLVTVYITNYNYGRFLRQAVESVFAQTLHDYELLIIDDGSTDGSRDIVLEYEGRPG
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEEECCCCC
VRVLLQQNAGLNRTSNTALGMARGRYIMRLDADDYLAPEALAVMTDILERNPSVGLVFPD
EEEEEECCCCCCCCCCCCEEHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECC
YYYVDENGAVIGREIRNDFNGGVSLPDMPAHGACTLIRRSHLLSVGGYSEEFRCQDGYDL
EEEECCCCCEECHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCHHH
WLRFIEKHDVRNVNEPLFYYRQHGGSLSGDRRMIVETRARIKEAHARRSNRPACPTLAFV
HHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCEEEEE
PVRGLSVDPHCLALEQLGGRTLLDWTLDAALEATQLCGVAVTTPDAAVMDHVRRRYGSAV
EECCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCEE
HIVERPRAFARSNTALHDTLQHVLDSLPLLARQARACMMLSVETPFRSSLYIDKAVNTAR
EEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEECCCCEEE
IFDVDTVIPVNPENDLFFRHDGTGLQLVGNNQRYGGMRFEREYLFRAVPGLHLLTRGWYE
EEECCEEEECCCCCCEEEEECCCEEEEEECCCCCCCEEHHHHHHHHHCCCHHHHHCCCCC
KSPHWLGDRVGHIVLAGDALHVVSSARDLAVAETLLRLERERICAE
CCCCHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASQPLVTVYITNYNYGRFLRQAVESVFAQTLHDYELLIIDDGSTDGSRDIVLEYEGRPG
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEEECCCCC
VRVLLQQNAGLNRTSNTALGMARGRYIMRLDADDYLAPEALAVMTDILERNPSVGLVFPD
EEEEEECCCCCCCCCCCCEEHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECC
YYYVDENGAVIGREIRNDFNGGVSLPDMPAHGACTLIRRSHLLSVGGYSEEFRCQDGYDL
EEEECCCCCEECHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCHHH
WLRFIEKHDVRNVNEPLFYYRQHGGSLSGDRRMIVETRARIKEAHARRSNRPACPTLAFV
HHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCEEEEE
PVRGLSVDPHCLALEQLGGRTLLDWTLDAALEATQLCGVAVTTPDAAVMDHVRRRYGSAV
EECCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCEE
HIVERPRAFARSNTALHDTLQHVLDSLPLLARQARACMMLSVETPFRSSLYIDKAVNTAR
EEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEECCCCEEE
IFDVDTVIPVNPENDLFFRHDGTGLQLVGNNQRYGGMRFEREYLFRAVPGLHLLTRGWYE
EEECCEEEECCCCCCEEEEECCCEEEEEECCCCCCCEEHHHHHHHHHCCCHHHHHCCCCC
KSPHWLGDRVGHIVLAGDALHVVSSARDLAVAETLLRLERERICAE
CCCCHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11943778 [H]