Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is ygfJ [C]

Identifier: 78358586

GI number: 78358586

Start: 3507700

End: 3508854

Strand: Direct

Name: ygfJ [C]

Synonym: Dde_3547

Alternate gene names: 78358586

Gene position: 3507700-3508854 (Clockwise)

Preceding gene: 78358585

Following gene: 78358589

Centisome position: 94.03

GC content: 65.71

Gene sequence:

>1155_bases
ATGCCCCGCAGTTTATCCACCCCCGGCCTGCGTCAGCAGGATAACAGCGCGTGCCGGGGGCCCAAACCGGCCCCGCCTCC
GGCGCTGTGTCTTCCCGCATGGCCGCCGCAGGACATCACAGGCCCGTTGCCGCGCATCGGCGGTATTATTCTGGCCGCAG
GAGAATCATCACGCATGGGGCGGTGCAAAGCCATACTGCCCCTCGGCGGCAGCACCGTTCTGGAACAGACGGCGCTGGCG
CTGGCAGCGGCCGTCACAGGCCCCGTGGTTGTCGTCTGCGGTCATCACGGCGATGCTGTCCGCGCCGAAGCCCGCCGCTG
CGGTCTGACCGCCGTGACCAACCCGCATCCTGAAAACGGCATGTTTTCCTCTGTACAGTGCGGCATACAGGCCATTGTCT
CTCACGTTGACGCGGCCTTTATTCTGCCCGTTGACACCCCGCTGGTGCGCGCGTCCACCTGCATGCTGCTTGCGGCCTCC
TTTGTCCGGCAGGGGCACGCCGTCACGCTGCCTGTGGCATCGCCGCACCGCAGCCGCACGGGTCATCCGCCGCTGCTGCG
CGCTGATGTGTTGCGCAGCGTACTGCGGCATGACGGCAAAGACGGACTGCGGGCCGTCATCCGGGCATTTGCAGACCTCG
GCATGAACACCACGGTGCCCGTTGCCGATGAAGGCTGCCTGCGCGACATGGACACGCCCGAAGCATACAGGCTGGCCGTT
GCGGCCTTCAGACGCAGGCACATCCCCACGGCAGGCGAAGTGCTGGCGCTGCTTGAGATTGCCGCAACGCCGCCCCATGT
GCGCGCACACGGGGTACGCGTGGGACAGGCGGCCGCTCTGTTCGCCTGCCGGATGGTCAGCTGCGCCTCTCCGTCCGTTG
AATCTCTGCCCGATGCCGGTCTTGCCCTTGCATCCGGTACCCTGCACGATATATTGAAGGGCTACAGGCAGCACGAAAAA
GCCGGCGGAGCCATGCTGCGCCGGTACGGATTTGACGCCGCAGCGCGCATAGTGGCGGCCCACAGGGATACGGACCCCGC
GCGGGTGCGCATACCCGGTGAACGCGAACTGGTCATGCTGGCGGATAAATACATACGGGGCACGACGCTGATTCCCATGG
AAGAACGCTTTGACCAACGCATAGCAGGCCGTTGA

Upstream 100 bases:

>100_bases
GCCTGGAAATCGGGGCACGCACTCCCGAAGAAATCGCCGTGAGCATCATGGCGGAAATCATCGCCTGCCGTGCCGCCGGC
AACGGAGACGGAGCAAGCTG

Downstream 100 bases:

>100_bases
AAAAGTCGATATTTCCGGTTTTCACACCAAAGACTTGCTCACCGCAGCAACTGGCATGAGATTGTTGGGGTGCTCCTCAT
GTACCGCGAAAACGAGCAAT

Product: MobA-like protein-like

Products: NA

Alternate protein names: 4-Diphosphocytidyl-2C-Methyl-D-Erythritol Synthase; Molybdopterin-Guanine Dinucleotide Biosynthesis Protein A; Molybdenum Hydroxylase Accessory Protein YgfJ Family; MobA-Like Protein-Like; 4-Diphosphocytidyl-2C-Methyl-D-Erythritolsynthas E; Molybdenum Cofactor Biosynthesis Protein; Metal-Dependent Phosphohydrolase HD Sub Domain Protein; HD Domain-Containing Protein; MobA-Like Protein; Regulatory Protein; Molybdopterin-Guanine Dinucleotide Biosynthesis Protein; MobA-Related Protein; Purine Catabolism Protein PucB; Phosphoglycerate/Bisphosphoglycerate Mutase; Domain HDIG Containing Protein; HD Domain Protein; Regulatory Protein LysR

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MPRSLSTPGLRQQDNSACRGPKPAPPPALCLPAWPPQDITGPLPRIGGIILAAGESSRMGRCKAILPLGGSTVLEQTALA
LAAAVTGPVVVVCGHHGDAVRAEARRCGLTAVTNPHPENGMFSSVQCGIQAIVSHVDAAFILPVDTPLVRASTCMLLAAS
FVRQGHAVTLPVASPHRSRTGHPPLLRADVLRSVLRHDGKDGLRAVIRAFADLGMNTTVPVADEGCLRDMDTPEAYRLAV
AAFRRRHIPTAGEVLALLEIAATPPHVRAHGVRVGQAAALFACRMVSCASPSVESLPDAGLALASGTLHDILKGYRQHEK
AGGAMLRRYGFDAAARIVAAHRDTDPARVRIPGERELVMLADKYIRGTTLIPMEERFDQRIAGR

Sequences:

>Translated_384_residues
MPRSLSTPGLRQQDNSACRGPKPAPPPALCLPAWPPQDITGPLPRIGGIILAAGESSRMGRCKAILPLGGSTVLEQTALA
LAAAVTGPVVVVCGHHGDAVRAEARRCGLTAVTNPHPENGMFSSVQCGIQAIVSHVDAAFILPVDTPLVRASTCMLLAAS
FVRQGHAVTLPVASPHRSRTGHPPLLRADVLRSVLRHDGKDGLRAVIRAFADLGMNTTVPVADEGCLRDMDTPEAYRLAV
AAFRRRHIPTAGEVLALLEIAATPPHVRAHGVRVGQAAALFACRMVSCASPSVESLPDAGLALASGTLHDILKGYRQHEK
AGGAMLRRYGFDAAARIVAAHRDTDPARVRIPGERELVMLADKYIRGTTLIPMEERFDQRIAGR
>Mature_383_residues
PRSLSTPGLRQQDNSACRGPKPAPPPALCLPAWPPQDITGPLPRIGGIILAAGESSRMGRCKAILPLGGSTVLEQTALAL
AAAVTGPVVVVCGHHGDAVRAEARRCGLTAVTNPHPENGMFSSVQCGIQAIVSHVDAAFILPVDTPLVRASTCMLLAASF
VRQGHAVTLPVASPHRSRTGHPPLLRADVLRSVLRHDGKDGLRAVIRAFADLGMNTTVPVADEGCLRDMDTPEAYRLAVA
AFRRRHIPTAGEVLALLEIAATPPHVRAHGVRVGQAAALFACRMVSCASPSVESLPDAGLALASGTLHDILKGYRQHEKA
GGAMLRRYGFDAAARIVAAHRDTDPARVRIPGERELVMLADKYIRGTTLIPMEERFDQRIAGR

Specific function: Unknown

COG id: COG2068

COG function: function code R; Uncharacterized MobA-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40679; Mature: 40547

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSLSTPGLRQQDNSACRGPKPAPPPALCLPAWPPQDITGPLPRIGGIILAAGESSRMG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCEEEECCCCCCCC
RCKAILPLGGSTVLEQTALALAAAVTGPVVVVCGHHGDAVRAEARRCGLTAVTNPHPENG
CEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCEEECCCCCCCC
MFSSVQCGIQAIVSHVDAAFILPVDTPLVRASTCMLLAASFVRQGHAVTLPVASPHRSRT
CHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
GHPPLLRADVLRSVLRHDGKDGLRAVIRAFADLGMNTTVPVADEGCLRDMDTPEAYRLAV
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHH
AAFRRRHIPTAGEVLALLEIAATPPHVRAHGVRVGQAAALFACRMVSCASPSVESLPDAG
HHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCEEHHHHHHHHHHHHHHCCCCCHHHCCCCC
LALASGTLHDILKGYRQHEKAGGAMLRRYGFDAAARIVAAHRDTDPARVRIPGERELVML
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCCCEEEE
ADKYIRGTTLIPMEERFDQRIAGR
EHHHHCCCEECCHHHHHHHHHCCC
>Mature Secondary Structure 
PRSLSTPGLRQQDNSACRGPKPAPPPALCLPAWPPQDITGPLPRIGGIILAAGESSRMG
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCEEEECCCCCCCC
RCKAILPLGGSTVLEQTALALAAAVTGPVVVVCGHHGDAVRAEARRCGLTAVTNPHPENG
CEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCEEECCCCCCCC
MFSSVQCGIQAIVSHVDAAFILPVDTPLVRASTCMLLAASFVRQGHAVTLPVASPHRSRT
CHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
GHPPLLRADVLRSVLRHDGKDGLRAVIRAFADLGMNTTVPVADEGCLRDMDTPEAYRLAV
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHH
AAFRRRHIPTAGEVLALLEIAATPPHVRAHGVRVGQAAALFACRMVSCASPSVESLPDAG
HHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCEEHHHHHHHHHHHHHHCCCCCHHHCCCCC
LALASGTLHDILKGYRQHEKAGGAMLRRYGFDAAARIVAAHRDTDPARVRIPGERELVML
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCCCEEEE
ADKYIRGTTLIPMEERFDQRIAGR
EHHHHCCCEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA