| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is modB [H]
Identifier: 78358558
GI number: 78358558
Start: 3479655
End: 3480329
Strand: Direct
Name: modB [H]
Synonym: Dde_3519
Alternate gene names: 78358558
Gene position: 3479655-3480329 (Clockwise)
Preceding gene: 78358557
Following gene: 78358559
Centisome position: 93.28
GC content: 60.15
Gene sequence:
>675_bases ATGCTGGAAGCGGTACCCGCCATAGCAGACCCGCTGTACCTTTCGGTCAAGCTGGCATTCTTCACCACGCTGTTCATTCC CGTGGCAGCGCTGCCGCTGGCGTGGCTGTTCGCCTTCCGCCGGTTTGCCGGTAAAAGTCTGGCCGAGGCCTTTGTGGCCC TGCCCATGGTTCTGCCCCCCACGGTGCTGGGTTTCTGGCTGCTTGTGGTCATGGGCCCCAACGGATTCATGGGGCAGGCG TGGCAGGCGGTTTTCAACGAACGGCTGATTTTCAGCTTTCCCGCCATTCTGCTGGCATCCGTGGTATACAACATGCCTTT TGCGGTGCAGCCGCTGCGGGCCACCTTTGAAAAAATGGACAGAAGACTGCTGGAATGTTCCGCCGTACTGGGGCTTTCGC CGCTTGCCACATTCCGCAGGGTCATTCTGCCCAACAGCCTGCCGGGGCTTGCCGCCTCTTCCGTGCTGGTGTTCGCCCAC AGTCTGGGTGAATTCGGCGTCATCCTGATGGTGGGCGGCAGCATGCCGGGCACCACAAAAGTGGCATCCATCGCCATATA CGAAGCCGTGGAAGCGCTGCGCTATGACGATGCCTTTCTGCTGTGTCTGGCGCTGGTACCCGCCAGCTTCATCGTGCTGC TGGCCGTAAACAGAATGAACAGGAGCCTGCAATGA
Upstream 100 bases:
>100_bases CTGAAAAGCGCTCCGAATCCGCAGGCTGCCGCCAGATTTGTCGAATTCCTCAATTCGCCTCTGGTCGCTGAAATCAAGGC AAAATACGGATACGAATAGC
Downstream 100 bases:
>100_bases CTCTGGACGCCCGCATCTGCAAAACGCTGCCCCACTTCACGCTGGACGTTGCCATGACATGCCCCTGCGGTCACCTTACA GCCGTTGTGGGGCCGTCAGG
Product: molybdate ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MLEAVPAIADPLYLSVKLAFFTTLFIPVAALPLAWLFAFRRFAGKSLAEAFVALPMVLPPTVLGFWLLVVMGPNGFMGQA WQAVFNERLIFSFPAILLASVVYNMPFAVQPLRATFEKMDRRLLECSAVLGLSPLATFRRVILPNSLPGLAASSVLVFAH SLGEFGVILMVGGSMPGTTKVASIAIYEAVEALRYDDAFLLCLALVPASFIVLLAVNRMNRSLQ
Sequences:
>Translated_224_residues MLEAVPAIADPLYLSVKLAFFTTLFIPVAALPLAWLFAFRRFAGKSLAEAFVALPMVLPPTVLGFWLLVVMGPNGFMGQA WQAVFNERLIFSFPAILLASVVYNMPFAVQPLRATFEKMDRRLLECSAVLGLSPLATFRRVILPNSLPGLAASSVLVFAH SLGEFGVILMVGGSMPGTTKVASIAIYEAVEALRYDDAFLLCLALVPASFIVLLAVNRMNRSLQ >Mature_224_residues MLEAVPAIADPLYLSVKLAFFTTLFIPVAALPLAWLFAFRRFAGKSLAEAFVALPMVLPPTVLGFWLLVVMGPNGFMGQA WQAVFNERLIFSFPAILLASVVYNMPFAVQPLRATFEKMDRRLLECSAVLGLSPLATFRRVILPNSLPGLAASSVLVFAH SLGEFGVILMVGGSMPGTTKVASIAIYEAVEALRYDDAFLLCLALVPASFIVLLAVNRMNRSLQ
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=193, Percent_Identity=30.0518134715026, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI1786980, Length=219, Percent_Identity=32.8767123287671, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI87082099, Length=176, Percent_Identity=31.8181818181818, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI1787369, Length=182, Percent_Identity=29.6703296703297, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1787713, Length=184, Percent_Identity=30.9782608695652, Blast_Score=64, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24325; Mature: 24325
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEAVPAIADPLYLSVKLAFFTTLFIPVAALPLAWLFAFRRFAGKSLAEAFVALPMVLPP CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCH TVLGFWLLVVMGPNGFMGQAWQAVFNERLIFSFPAILLASVVYNMPFAVQPLRATFEKMD HHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH RRLLECSAVLGLSPLATFRRVILPNSLPGLAASSVLVFAHSLGEFGVILMVGGSMPGTTK HHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH VASIAIYEAVEALRYDDAFLLCLALVPASFIVLLAVNRMNRSLQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLEAVPAIADPLYLSVKLAFFTTLFIPVAALPLAWLFAFRRFAGKSLAEAFVALPMVLPP CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCH TVLGFWLLVVMGPNGFMGQAWQAVFNERLIFSFPAILLASVVYNMPFAVQPLRATFEKMD HHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH RRLLECSAVLGLSPLATFRRVILPNSLPGLAASSVLVFAHSLGEFGVILMVGGSMPGTTK HHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH VASIAIYEAVEALRYDDAFLLCLALVPASFIVLLAVNRMNRSLQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8384683; 7665518 [H]