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The map label for this gene is yggA [H]

Identifier: 78358514

GI number: 78358514

Start: 3436604

End: 3437254

Strand: Direct

Name: yggA [H]

Synonym: Dde_3475

Alternate gene names: 78358514

Gene position: 3436604-3437254 (Clockwise)

Preceding gene: 78358512

Following gene: 78358516

Centisome position: 92.13

GC content: 63.13

Gene sequence:

>651_bases
ATGCACGCAACCACACCAGAGGACCCCATGAACTCCGCAGTATTTTTTCAGGGATTCGGCATCTGTGCCGGCCTTATCAT
CGCCATAGGCGCCCAGAACGCCTTCATCCTGTCACAGGGAATCCGCGGCAGGCATGTGCTGACCGTGGCACTGCTGTGCT
GCCTGTGCGATGTGCTCCTCATATCGCTGGGACTTTCCGGTGTGGGTGCATTTGTCTCTTCCAGCAGTGCTCTCACCGCA
GCCACGGCCTGGGCGGGTGTGGTGTTTCTCAGCTGGTACGGACTGGGCGCGCTGCGTTCCGCCATCAGAGGCGGCACGCT
GGAAGCCGATACCCGCGGTTCCGACAGTCTGCGGGCCGTGGCTGCGACCACCATTGCCGTGTCGCTGCTTAACCCGCACG
CATGGCTGGATACTGTGGTGCTGCTGGGCGGCATCAGCGGGCAATACCCCGAAAGCCAGCGCTTCGTTTTCGGCGCGGGG
GCGCTCAGCGCCTCGTTTGTCTGGTTTTTTTCGCTTGCATTCGGCGCCCGTCTGCTGGCCCCGCTGTTCCGGCGGCCCGC
CACATGGCGCATGCTCGACGGCTTTGTCTGCCTGACCATGTGGGGCATTGCCGCCTCACTGGCGCACCATGCACTGTCAC
TTACGGCGTAG

Upstream 100 bases:

>100_bases
GCCTCTATAAGCCGGTATTCAAGCATGACCTGACATTAGCGAAACTTATGCAGCATATAAACTAGTAATTTCACTTCTTG
AACGCGGGGGTATATCTCCC

Downstream 100 bases:

>100_bases
CACCTGCACGCTGTTATCATAGTCAGGCTCCTGCGGCGGTTTTCCCGTATCCTCATCATCTCCTCCGCCGCAGAAGCCGC
CTCACAAACACACCCCGGTG

Product: L-lysine exporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MHATTPEDPMNSAVFFQGFGICAGLIIAIGAQNAFILSQGIRGRHVLTVALLCCLCDVLLISLGLSGVGAFVSSSSALTA
ATAWAGVVFLSWYGLGALRSAIRGGTLEADTRGSDSLRAVAATTIAVSLLNPHAWLDTVVLLGGISGQYPESQRFVFGAG
ALSASFVWFFSLAFGARLLAPLFRRPATWRMLDGFVCLTMWGIAASLAHHALSLTA

Sequences:

>Translated_216_residues
MHATTPEDPMNSAVFFQGFGICAGLIIAIGAQNAFILSQGIRGRHVLTVALLCCLCDVLLISLGLSGVGAFVSSSSALTA
ATAWAGVVFLSWYGLGALRSAIRGGTLEADTRGSDSLRAVAATTIAVSLLNPHAWLDTVVLLGGISGQYPESQRFVFGAG
ALSASFVWFFSLAFGARLLAPLFRRPATWRMLDGFVCLTMWGIAASLAHHALSLTA
>Mature_216_residues
MHATTPEDPMNSAVFFQGFGICAGLIIAIGAQNAFILSQGIRGRHVLTVALLCCLCDVLLISLGLSGVGAFVSSSSALTA
ATAWAGVVFLSWYGLGALRSAIRGGTLEADTRGSDSLRAVAATTIAVSLLNPHAWLDTVVLLGGISGQYPESQRFVFGAG
ALSASFVWFFSLAFGARLLAPLFRRPATWRMLDGFVCLTMWGIAASLAHHALSLTA

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=200, Percent_Identity=40, Blast_Score=134, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22564; Mature: 22564

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHATTPEDPMNSAVFFQGFGICAGLIIAIGAQNAFILSQGIRGRHVLTVALLCCLCDVLL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
ISLGLSGVGAFVSSSSALTAATAWAGVVFLSWYGLGALRSAIRGGTLEADTRGSDSLRAV
HHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
AATTIAVSLLNPHAWLDTVVLLGGISGQYPESQRFVFGAGALSASFVWFFSLAFGARLLA
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
PLFRRPATWRMLDGFVCLTMWGIAASLAHHALSLTA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHATTPEDPMNSAVFFQGFGICAGLIIAIGAQNAFILSQGIRGRHVLTVALLCCLCDVLL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
ISLGLSGVGAFVSSSSALTAATAWAGVVFLSWYGLGALRSAIRGGTLEADTRGSDSLRAV
HHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
AATTIAVSLLNPHAWLDTVVLLGGISGQYPESQRFVFGAGALSASFVWFFSLAFGARLLA
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
PLFRRPATWRMLDGFVCLTMWGIAASLAHHALSLTA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]